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scnpilot_solids1_trim150_scaffold_140_curated_24

Organism: solids_Sphingobacteriales_4

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 27924..28808

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SC86_PEDSD similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 284.0
  • Bit_score: 329
  • Evalue 2.70e-87
HTH-type transcriptional activator RhaS {ECO:0000313|EMBL:KHJ39027.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 287.0
  • Bit_score: 334
  • Evalue 1.20e-88
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 284.0
  • Bit_score: 329
  • Evalue 8.50e-88

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Taxonomy

Pedobacter glucosidilyticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 885
ATGAAGCCTCACTTATTAAAATTCAACCTAAAAAACGAAAGCAGTTTTGTAATACGACATGACGTTGTACCTCACTTTTATAATAAATGGCAATACCATCCCGAGTTGGAATTGGTATATATTATCAAAGGCTCAGGAAGGCAATTCATAGGAGATAATGTGCACCACTTTAAGGCGGGCGATATGATCTTGCTGGGCTCCAATCTTCCTCACCTGTGGCGTAACGAAGAAAAATATTTTAAAAAAAATTCCAGGTTAAGCGCTGAAGCGATCGTAGTACATTTTATGCCTGATTGCCTTGGTGAATATTTTTTAAAGCTGCCCGAAAATAAAGCATTACCAAAGCTTTTTGAAAGAGCGCAACAGGCCGTACGAATAAAAAATAATACCAGGAGTAAGATCATTGAACTATTGGAAAAACTATTAACAGCAAAGGGCAGTGAGCGAATTATTTTGCTACTGCAGATTTTAAATTCTATTGCTATATCAAAAGAAACCAAAACCGTGTGTAGCAAAGGTTTGCAATTTCATTACCCCACTTCTGATTCAGACCGGTTGAATCATATTTACCAATACATTCTTAATAACTTTTCCAGGGAGATTACTTTGGCTCAAATTGCCAATGTTGCCCACATAAGCCCACATTCCTTTTGCCGTTATTTCAAGAGTAGAATAAAAAAAACGTTCTCTGCTTTTTTATTGGAAGTGCGCGTAGGACATGCGTGTAAACTACTCGCTGAAACGAATAAGAGCGTTGCAGAAATCTGTTTTGAATCGGGGTTCAATACTTTTTCAAACTTCAACCGGCATTTTAAAGCTATAACAGGAACCACTCCATTACTACATAGATATCATTATCAACATATATCTACATTGCCTGTTTAG
PROTEIN sequence
Length: 295
MKPHLLKFNLKNESSFVIRHDVVPHFYNKWQYHPELELVYIIKGSGRQFIGDNVHHFKAGDMILLGSNLPHLWRNEEKYFKKNSRLSAEAIVVHFMPDCLGEYFLKLPENKALPKLFERAQQAVRIKNNTRSKIIELLEKLLTAKGSERIILLLQILNSIAISKETKTVCSKGLQFHYPTSDSDRLNHIYQYILNNFSREITLAQIANVAHISPHSFCRYFKSRIKKTFSAFLLEVRVGHACKLLAETNKSVAEICFESGFNTFSNFNRHFKAITGTTPLLHRYHYQHISTLPV*