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scnpilot_solids1_trim150_scaffold_768_curated_1

Organism: solids_Sphingobacteriales_4

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(60..1355)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system protein VirD4 n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GRK7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 46.3
  • Coverage: 419.0
  • Bit_score: 346
  • Evalue 3.10e-92
Type IV secretion system protein VirD4 {ECO:0000313|EMBL:CCH56535.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.3
  • Coverage: 419.0
  • Bit_score: 346
  • Evalue 4.40e-92
TRAG family protein; K03205 type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 38.2
  • Coverage: 429.0
  • Bit_score: 291
  • Evalue 3.70e-76

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Taxonomy

Fibrisoma limi → Fibrisoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1296
ATGAACACTCATTCCAGACCTTCGGGTCAGGCGGCTATTGATTTGGCCGAGGTCGCCGCTTTATTCAAAGGCCAAAAGGACGCAGAATATAAAACAAAAACTGTCCTGTTCCTTATCGGTATTTTTTTGACGCCGCTCACCCTCGCTGGCGCATTAATCGGATATGCCCGCGCCTATAACCGCTTTTTGCGTGGCAGCGGTCAACCGCCGGTCTTGTATAATCTGCCTGCTATCGTTCGCATGGCAATGGTCATGGGCAGCGCAACTATCTGGGCCTTTCTCATCATACTGTTTTATGCGCTCATTTTTTTGCTGCACATCTTCTTCGGCAGGGAGGTCATGGGCTCACCCGCCCCGTTTATCCTGCTTTTATTGAACAGCGTACTGACCTTTGTGGTGTTCGCTTTGTTCAACCGCTGGCGCAACCGGATATTCAGGGAGCTTTATGTGCGTACCCGCTACGGCACGGCACGTTTTGCCAAACCGGAAGAATTGCAGGATTTGACGGGAAAGAAAGGCGTTTATATTGGTGGCGATATTTATAGCTATTTCAAACAGGGCCACATCCTTACTGTGTGCAAGACACGCGGCGGCAAAGGCACCAATTTGATTATTCCCAATCTTTTGGGTAAAGGAGGTTATCAGGGAAGTATCGTCGTCATTGATCCCAAAGCGGAAAACATTGCGGTTACGGCACGGTATCAAGGGAAAATAGGGCAGCATGTTCTGGCGCTTGATCCGTGGGGACTTCACACCGGCGAAGGTGCGACATTCAACCCCCTCGATCTCCTGTCCGCCAACCCGGATGACGACAGGCTTTCTGACGATGCCGACAGCCTCGCTGAAATGATTGTGCCTTTTGATGCAACGGCTAAAGACCAGTTTTTTAACGACCGGGCCCGGGCCCTGATTTGCGGCATGTTTATTTTTATCGCTATTTCGCAAACACCGGAAAACAGGACACTGACGACCTTGTGGAAATGGCTCCGTCTGTCACTGGACGAGTTGGGCGAACTATTGGCTCAAATGTCCGTGTGCGACAATGCCGTCGTTCGGGCGTGTGCCAATGAAGCAGCCAACATCATGAGCGCCACGCCCAAGACGTTCGCTTCCATTCTTTCATCTGCCCAGCAGTTCACCGACTTCCTGAAAAGCGTACCGCTGCAACGTTCCCTTGCCTCGTCGAACTTCAGTATCAACGATCTCGCCAAAGAAAAAACAAGCCTTTATATTATTATACCGCCCGACCTGATCGTTACAAAGGTCTCATGTATGAGAAGGAGACCTTACCAATGA
PROTEIN sequence
Length: 432
MNTHSRPSGQAAIDLAEVAALFKGQKDAEYKTKTVLFLIGIFLTPLTLAGALIGYARAYNRFLRGSGQPPVLYNLPAIVRMAMVMGSATIWAFLIILFYALIFLLHIFFGREVMGSPAPFILLLLNSVLTFVVFALFNRWRNRIFRELYVRTRYGTARFAKPEELQDLTGKKGVYIGGDIYSYFKQGHILTVCKTRGGKGTNLIIPNLLGKGGYQGSIVVIDPKAENIAVTARYQGKIGQHVLALDPWGLHTGEGATFNPLDLLSANPDDDRLSDDADSLAEMIVPFDATAKDQFFNDRARALICGMFIFIAISQTPENRTLTTLWKWLRLSLDELGELLAQMSVCDNAVVRACANEAANIMSATPKTFASILSSAQQFTDFLKSVPLQRSLASSNFSINDLAKEKTSLYIIIPPDLIVTKVSCMRRRPYQ*