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scnpilot_solids1_trim150_scaffold_3912_curated_4

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 1867..2148

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbB n=1 Tax=Sphingomonas sp. LH128 RepID=J8W3V9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 93.0
  • Bit_score: 193
  • Evalue 1.30e-46
Conjugal transfer protein TrbB {ECO:0000313|EMBL:EJU15028.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 93.0
  • Bit_score: 193
  • Evalue 1.80e-46
conjugal transfer protein TrbB; K03198 type IV secretion system protein VirB3 similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 93.0
  • Bit_score: 171
  • Evalue 9.40e-41

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Taxonomy

Sphingomonas sp. LH128 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 282
ATGGCCGACGGCGCGGATCATGGCGGCGAACTGCCGGGCTTCTCAGTCCCGGTCCACCGGGCGCTGACCGAGCACATCCTGCTCGGCGGCGCGCCGCGTTCGCTGGCCATCCTGAACGGCACTCTGGCCGCCGCGCTCGGCCTCGGCCTGCGCCTCTGGCTGGTCGGCCTCGGCCTCTGGGCCGTCGGGCATTTCGCGGCCGTCTGGGCCGCCAAGCGCGATCCCCAGTTCGTCGACGTCGTGCGCAAGCATCTGCGCATCCCCGGCCACCTGTCGGTCTGA
PROTEIN sequence
Length: 94
MADGADHGGELPGFSVPVHRALTEHILLGGAPRSLAILNGTLAAALGLGLRLWLVGLGLWAVGHFAAVWAAKRDPQFVDVVRKHLRIPGHLSV*