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scnpilot_solids2_trim150_scaffold_142_curated_23

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: 26870..28045

Top 3 Functional Annotations

Value Algorithm Source
sugar ABC transporter, partial n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF009 similarity UNIREF
DB: UNIREF100
  • Identity: 39.6
  • Coverage: 379.0
  • Bit_score: 284
  • Evalue 2.30e-73
Cyclodextrin-binding protein {ECO:0000313|EMBL:KJL30459.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.3
  • Coverage: 391.0
  • Bit_score: 256
  • Evalue 7.10e-65
ABC transporter substrate-binding protein (sugar); K02027 multiple sugar transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 35.9
  • Coverage: 396.0
  • Bit_score: 212
  • Evalue 2.60e-52

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Taxonomy

Microbacterium oxydans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1176
ATGCCATCAGGTGAGATCTCATTCGCCAATCCGGACCTGCTGCAGCCTGTCAGGGGTGACGCTTTGTGGGCCGTCATAGCGGATTACCAAAAGGCCAACCCGAACGTCAAGATGGTCAAGGTGGACCCACCCTATGCACAGTTCACCCAGGTCATCGACACTCAATTCGGTGCGGGTGGCGGGCCCGACATCTTCACCGGCGATGTGGGGGCCGTAGCGAAGTACTTCAAGTCCGGCCTCTTGGTCGCGCTGGACGACGTGTTCCCGGCCGGCACGCTGAACAGCACCGCAGACGCGGGCAAGGTCAACGGGGTCTTGTATGGGGTGCCGTTCCAGACCGTCAACTATGCCTTGATCTGGAACAAGAGCCTCATCGCGAAGGCCGGAATTGAGTCTCCGCCGAAGACGTTCGATGAATTGCTGGCAGATGCGAAGCAATGCAAGGAGAAGTTGGGCGTCATCGGATTCGCGGGCCGCTCCCAGATGAACGAGATGGACGGTTGGTGGACCGACTTCAATGCATGGGTCCAAGGCTTCGGTGGTGCGATGGCCAAAGATGGCAAGCTGACCTTGAACGCTCCGGAGAACATCGCCGCGGTCACCGCGTTCAAGCAGATGTACGATTCCGGTGCCTTCTCGGTCGGCGACGACGCTTCGACCTTTCGATTGAAGTTTGGTCAGGGTCAGGTCTGCTTCGCCATCGAGAACAGTGCGTCGGCAAACATCGCCACTACCAATACCGCCGGGCATCTGGCGCCGGATAATCTGGGGGTCTCGAAGACACCCTTCCCGACCACCGGGTACGCCGTAATTCCGCAGATGTTGCTGGTCAACAAGCACAGCAAGAACCTCGATGCTGTCAAGGCATTCCTGAAGTGGTTTTACGCAAAGCCGCAGCAGCAGCGGATCGCCGAGATCGAAGCACCCGCAGTGTTGGGGACAGACACGCCACCGTCAGCTGATTACATGACGGCGCACCCGTGGGCGGCCGGGTACATGGACCTGCCGAAGACCGGTACCGGAAAGTCGAATGTCGTGCCGGGTTTCGAGGCGCAGACGCCTCAGATCGAAAAGATCTTCCTCACGGCGTTCTCCAAGGTGCTGACCGAGAACGCATCGCCCACTGATGCACTCAACGCAGCGCAATCGCAGGCGCAGTCCGAAATCGGCGGATAG
PROTEIN sequence
Length: 392
MPSGEISFANPDLLQPVRGDALWAVIADYQKANPNVKMVKVDPPYAQFTQVIDTQFGAGGGPDIFTGDVGAVAKYFKSGLLVALDDVFPAGTLNSTADAGKVNGVLYGVPFQTVNYALIWNKSLIAKAGIESPPKTFDELLADAKQCKEKLGVIGFAGRSQMNEMDGWWTDFNAWVQGFGGAMAKDGKLTLNAPENIAAVTAFKQMYDSGAFSVGDDASTFRLKFGQGQVCFAIENSASANIATTNTAGHLAPDNLGVSKTPFPTTGYAVIPQMLLVNKHSKNLDAVKAFLKWFYAKPQQQRIAEIEAPAVLGTDTPPSADYMTAHPWAAGYMDLPKTGTGKSNVVPGFEAQTPQIEKIFLTAFSKVLTENASPTDALNAAQSQAQSEIGG*