ggKbase home page

scnpilot_solids2_trim150_scaffold_142_curated_24

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: 28168..29085

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, membrane spanning protein, partial n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF16B similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 269.0
  • Bit_score: 312
  • Evalue 3.50e-82
Inner membrane ABC transporter permease protein YcjO {ECO:0000313|EMBL:KJL30458.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.9
  • Coverage: 287.0
  • Bit_score: 315
  • Evalue 7.70e-83
ABC transporter membrane spanning protein; K02025 multiple sugar transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 44.7
  • Coverage: 300.0
  • Bit_score: 274
  • Evalue 5.70e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium oxydans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGACCACGCCGTCGTCGGTGGCGAGAGCGACGACCCGGCCGCTCGCGCGCATCGAGCCGTATCTGCTGTGCGCAATCGGCGCCGCCTACATCGTCTTACTGGTCATCGTGCCCATGATCAGGGGAATCAGCCTCAGCTTCACGGCGACGACGTTGCTCAACCCCACCTTCGGACAATATGTCGGGCTGGCCAACTACCAGAGGCTGCTGACCAGCGGGGCATTCTGGTCGTCGCTGTCGGTAAGTCTGGTCTACTGTTTCTGCACCGTGGCGGTATCGCTGGTGCTGGGCACGATCGCGGCAGTCCTGATCAACCGGAAGTTCGCTGGACGCGGGCTCGTACGGGCGCTCCTAATCGTGCCGTGGGCCATGCCCACGGTGGCGATCTACCTGCTCTTTCGGTGGATGTACAACGATTCGTCGGGGGTATTCAATCGACTGAGCTCTGCGCTCGGGTTCGGCAGACACGGGTGGCTGACCGATCCCAACCTTGCGCTGTGGTCGGTGCTGGTTGCGACGATCTGGAAGGTTCTGCCGTTCGTGATGCTGATCGTCTTGGCGGCGCTCCAGTCGATTCCGGAGGAGTTGTACGAGGCATCGCGAGTGGACGGAGCCGACCCGCTGAGCTCCTTTAAGACCGTCACGCTCCCGCACTTGCGCCCCACGATTCGCGTGGTAACCCTGCTGATGACGATCTGGTCGTTTCGCCAGTTCGACCTGCTCTATTTGCTCACTGGCGGTGGGCCCAACGGACGGACCAACACGCTCGTGGTCGACCTGTATCAGGACGCGTTTCAGAGCAATGAACTGGGTAGCGCTTCGGCGATCGGAGTAATCGGAATCGTATTCTCTCTGGGGGTGACGGTGATCTTCTTCCTTGCCGAGCGTCGGTCCATTCTCCGCGGGGGCTCACGGTGA
PROTEIN sequence
Length: 306
MTTPSSVARATTRPLARIEPYLLCAIGAAYIVLLVIVPMIRGISLSFTATTLLNPTFGQYVGLANYQRLLTSGAFWSSLSVSLVYCFCTVAVSLVLGTIAAVLINRKFAGRGLVRALLIVPWAMPTVAIYLLFRWMYNDSSGVFNRLSSALGFGRHGWLTDPNLALWSVLVATIWKVLPFVMLIVLAALQSIPEELYEASRVDGADPLSSFKTVTLPHLRPTIRVVTLLMTIWSFRQFDLLYLLTGGGPNGRTNTLVVDLYQDAFQSNELGSASAIGVIGIVFSLGVTVIFFLAERRSILRGGSR*