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scnpilot_solids2_trim150_scaffold_95_curated_6

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: 4908..5555

Top 3 Functional Annotations

Value Algorithm Source
Transmembrane protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SFC8_GEOOG similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 214.0
  • Bit_score: 324
  • Evalue 1.10e-85
transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 214.0
  • Bit_score: 324
  • Evalue 3.40e-86
Transmembrane protein {ECO:0000313|EMBL:ADB76782.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 214.0
  • Bit_score: 324
  • Evalue 1.50e-85

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Taxonomy

Geodermatophilus obscurus → Geodermatophilus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 648
GTGCTGGCCTTCCTGTGGCTTGCGTTCGTGTTTTTCAGCGTCGCGGCGTTCTTCTCGATCCTGGTCACCGGGCGTTATCCGCAGGCGTTGTTCGAGTTCAATGTCGGTGTCTTGCGGTGGAGTTGGCGCGTGCAGTACTACGGCTATGCGGCATTGGGGACCGATCGGTACCCGCCGTTCACGCTGGCCGACGTGCCGGACTATCCGGCACGTCTCGAGGTTCCTTATCCCACCCGTTTGTCTCGCGGTTTGGTGTTGGTGAAATGGTGGCTGCTGGCACTCCCGCACTACGTCGTGCTTGCATTGTTCGTGGGTGGGGGCATCTGGTTCGGCGCGCGCCAGTCCTCGGGCAATCCGTGGTGGGAAACCGGTTGGGGCGCCGGCGGTCTGGTTGGCCTGCTGGTGTTGATCGCGGCGGTCGTCCTGCTGTTCACCGGTCGGTATCCGCGGGCGCTGTACGACTTCGTGCTGGGCATGGATCGATGGGTGCTGCGGGTGGCGGCCCACGCAGGCTTGATGACCGACGCCTATCCACCGTTCCGTCTCGATATGGGCGGCCCGGACCCGGGTTCGGTGCTCGCCGCCGGGAATGGCCCGCTGCCGGCCGGCCCAGTCGGGCCACCTGCGGGACCGGCTCACGGTGCGTGA
PROTEIN sequence
Length: 216
VLAFLWLAFVFFSVAAFFSILVTGRYPQALFEFNVGVLRWSWRVQYYGYAALGTDRYPPFTLADVPDYPARLEVPYPTRLSRGLVLVKWWLLALPHYVVLALFVGGGIWFGARQSSGNPWWETGWGAGGLVGLLVLIAAVVLLFTGRYPRALYDFVLGMDRWVLRVAAHAGLMTDAYPPFRLDMGGPDPGSVLAAGNGPLPAGPVGPPAGPAHGA*