ggKbase home page

scnpilot_solids2_trim150_scaffold_224_curated_22

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: 25714..26655

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Rhodococcus sp. DK17 RepID=UPI0002E9685D similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 284.0
  • Bit_score: 328
  • Evalue 6.40e-87
sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 284.0
  • Bit_score: 328
  • Evalue 2.60e-87
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:EJJ01103.1}; TaxID=745408 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. JVH1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 284.0
  • Bit_score: 328
  • Evalue 1.20e-86

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodococcus sp. JVH1 → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 942
ATGACGGTGCACGACGAGCAGCTGACCGCGCAGTTCGAGCACCACCGGCTCCGGCTGCGGTCGATCGCCTACCGCATGCTGGGGTCGCTGGCCGACGCCGACGACGCAGTTCAGGAGACCTGGTTGCGCCTGGCGCGAACGGGCGCGGGCGAGATCGGCAACCTGGGCGGATGGCTGACCACCACGGTGTCGCGGATCTGCCTGGACATGCTGCGCACCCGGGCCACTCGCCGAGAGGACCCGCTGGATACGTACGTCCCGGACCCGATCGTCACCGTCGACGATGCCGATCCGGAACAGGAGTCGATGCTGGCCGATTCGATCGGTCTGGCGCTGCTGATGGTGCTCGACACGCTGGAACCCGCCGAGCGGCTGGCGTTCGTCCTGCACGACGTCTTCGCGGTTCCCTTCGACAGGATCGGCGCGACCCTGGACCGGTCCCCGGCGGCGGCCCGCCAATTGGCCAGCCGGGCACGCCGGCGGCTGCGCGAGGCGCCCACTCCCCCGACGGACCTGCGCCGGCAACGGCACCTGGTGGACAGCTTCCTCGCCGCCGCGCGCGACGGAAACCTCGACGCGCTCTACGACGTGCTCGACCCCGACGTCGTGCTGCGCGCCGACGCCGGCGACGGGCCACTGGGGCCATCGCGGGTCGTTCGAAGCGCCGCCGGGGTGATCGCCGAGGCACGGCACTACGCCGCGCTGGCTCGGTCCGGCCGGCGCGCGTTGGTCAACGACGCGCCCGGTCTGATCGTCATGCCGCACGACCGGGTGGTGGCGATCATGGCGCTGTCGTTCGGCGGCGGGCGCATTACGCGGATCGACATCCTGGCCGATCCGAAGCGGTTGGAGCGACTGGCCGACGCGTGGCGGGTGGACGGGCAACGCCCACTCGAGGGAGATGAACCAGGAGATGATCATGGACACAGCATCCATGCGTGA
PROTEIN sequence
Length: 314
MTVHDEQLTAQFEHHRLRLRSIAYRMLGSLADADDAVQETWLRLARTGAGEIGNLGGWLTTTVSRICLDMLRTRATRREDPLDTYVPDPIVTVDDADPEQESMLADSIGLALLMVLDTLEPAERLAFVLHDVFAVPFDRIGATLDRSPAAARQLASRARRRLREAPTPPTDLRRQRHLVDSFLAAARDGNLDALYDVLDPDVVLRADAGDGPLGPSRVVRSAAGVIAEARHYAALARSGRRALVNDAPGLIVMPHDRVVAIMALSFGGGRITRIDILADPKRLERLADAWRVDGQRPLEGDEPGDDHGHSIHA*