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scnpilot_solids2_trim150_scaffold_33_curated

Search features with annotation key words

Displaying items 121-150 of 237 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_33_curated_121
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134354..135790
DNA (1437bp) protein (479aa)
Nitrite reductase, copper-containing protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MEX9_9RHIZ
Nitrite reductase {ECO:0000313|EMBL:EZQ13050.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
nitrite reductase, copper-containing protein
scnpilot_solids2_trim150_scaffold_33_curated_122
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(135949..136659)
DNA (711bp) protein (237aa)
cyclic nucleotide-binding protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B49B3A
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EFI52471.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
nnrR; Nitrite and nitric oxide reductase transcriptional regulator (Crp/Fnr family)
scnpilot_solids2_trim150_scaffold_33_curated_123
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136743..137402
DNA (660bp) protein (220aa)
alternative oxidase 1 n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B628DB
oxidase
Alternative oxidase {ECO:0000313|EMBL:ADC72155.1}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sp. (strain K90mix).;"
scnpilot_solids2_trim150_scaffold_33_curated_124
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

137538..138656
DNA (1119bp) protein (373aa)
nitrite reductase, copper-containing; K00368 nitrite reductase (NO-forming) [EC:1.7.2.1]
nitrite reductase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036F886F
Nitrite reductase, copper-containing {ECO:0000313|EMBL:EHK53213.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
scnpilot_solids2_trim150_scaffold_33_curated_125
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138731..139591
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11NC6_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG61242.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_33_curated_126
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139748..140191)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003639A2C
pseudoazurin
Pseudoazurin {ECO:0000313|EMBL:ABG61246.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_33_curated_127
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140538..141281
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y8K1_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH11953.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_33_curated_128
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(141233..143341)
DNA (2109bp) protein (703aa)
ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12]
ATP-dependent DNA helicase RecG n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVK4_9RHIZ
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EHK55221.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
scnpilot_solids2_trim150_scaffold_33_curated_129
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143433..143720
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003801062
Uncharacterized protein {ECO:0000313|EMBL:CCV07248.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein; K09159 hypothetical protein
scnpilot_solids2_trim150_scaffold_33_curated_130
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143745..147248
DNA (3504bp) protein (1168aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
DEAD/DEAH box helicase; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
UPI0003CEE2F4 related cluster n=1 Tax=unknown RepID=UPI0003CEE2F4
scnpilot_solids2_trim150_scaffold_33_curated_131
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(147498..148181)
DNA (684bp) protein (228aa)
DSBA oxidoreductase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSR4_9RHIZ
DSBA oxidoreductase {ECO:0000313|EMBL:EHK56252.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
thiol oxidoreductase
scnpilot_solids2_trim150_scaffold_33_curated_132
Brucella suis, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148195..149997)
DNA (1803bp) protein (601aa)
Peptide ABC transporter, periplasmic peptide-binding protein n=4 Tax=Brucella suis RepID=G8NMJ6_BRUSS
peptide ABC transporter, periplasmic peptide-binding protein
Bicyclomycin resistance protein {ECO:0000313|EMBL:AJM86403.1}; TaxID=29461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella suis.;"
scnpilot_solids2_trim150_scaffold_33_curated_133
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150242..150874
DNA (633bp) protein (211aa)
Invasion associated locus B family protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSR2_9RHIZ
Invasion associated locus B family protein {ECO:0000313|EMBL:EHK56250.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Invasion associated locus B family protein
scnpilot_solids2_trim150_scaffold_33_curated_134
Mesorhizobium sp. LSJC285A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(150966..152234)
DNA (1269bp) protein (423aa)
UPI0003CF11AE related cluster n=1 Tax=unknown RepID=UPI0003CF11AE
Membrane protein {ECO:0000313|EMBL:ESW83735.1}; TaxID=1287338 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC285A00.;"
O-antigen polymerase
scnpilot_solids2_trim150_scaffold_33_curated_135
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152231..153778)
DNA (1548bp) protein (516aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HV00_9RHIZ
UDP-phosphate glucose phosphotransferase {ECO:0000313|EMBL:ESZ27678.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
Undecaprenyl-phosphate glucose phosphotransferase
scnpilot_solids2_trim150_scaffold_33_curated_136
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(153886..155022)
DNA (1137bp) protein (379aa)
UPI0003CF8C43 related cluster n=1 Tax=unknown RepID=UPI0003CF8C43
Putative transferase {ECO:0000313|EMBL:CDX56990.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
group 1 glycosyl transferase
scnpilot_solids2_trim150_scaffold_33_curated_137
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155053..155616)
DNA (564bp) protein (188aa)
Polysaccharide exporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HV02_9RHIZ
Polysaccharide exporter {ECO:0000313|EMBL:EHK55400.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
polysaccharide export protein; K01991 polysaccharide export outer membrane protein
scnpilot_solids2_trim150_scaffold_33_curated_138
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

155849..157972
DNA (2124bp) protein (708aa)
Exopolysaccharide transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HV03_9RHIZ
Exopolysaccharide transporter {ECO:0000313|EMBL:EHK55401.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
exopolysaccharide transport protein family
scnpilot_solids2_trim150_scaffold_33_curated_139
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(158009..159223)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FAB7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV13241.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_33_curated_140
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

159308..160366
DNA (1059bp) protein (353aa)
Polysaccharide deacetylase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FRQ7_9RHIZ
Polysaccharide deacetylase {ECO:0000313|EMBL:ESX81953.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
polysaccharide deacetylase
scnpilot_solids2_trim150_scaffold_33_curated_141
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160373..161404)
DNA (1032bp) protein (344aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
delta-aminolevulinic acid dehydratase (EC:4.2.1.24); K01698 porphobilinogen synthase [EC:4.2.1.24]
Delta-aminolevulinic acid dehydratase n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7F4L2_9RHIZ
scnpilot_solids2_trim150_scaffold_33_curated_142
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

161567..162622
DNA (1056bp) protein (352aa)
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial {ECO:0000313|EMBL:CDX31958.1}; EC=3.1.2.4 {ECO:0000313|EMBL:CDX31958.1};; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000370A722
enoyl-CoA hydratase/isomerase
scnpilot_solids2_trim150_scaffold_33_curated_143
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

162619..163050
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FRM7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX31703.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_33_curated_144
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

163185..163700
DNA (516bp) protein (172aa)
MarR family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI000367F492
MarR family transcriptional regulator {ECO:0000313|EMBL:EHH11852.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
MarR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_33_curated_145
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

164068..165324
DNA (1257bp) protein (419aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSI3_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56302.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_33_curated_146
Mesorhizobium sp. LNJC405B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

165525..166838
DNA (1314bp) protein (438aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC405B00.;"
Serine hydroxymethyltransferase n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G9V2_9RHIZ
glycine/serine hydroxymethyltransferase
scnpilot_solids2_trim150_scaffold_33_curated_147
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

166874..167338
DNA (465bp) protein (155aa)
NrdR family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI0003628116
ATP-cone domain-containing protein; K07738 transcriptional repressor NrdR
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
scnpilot_solids2_trim150_scaffold_33_curated_148
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

167342..168466
DNA (1125bp) protein (375aa)
Riboflavin biosynthesis protein RibD n=1 Tax=Nitratireductor indicus C115 RepID=K2PP26_9RHIZ
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
riboflavin biosynthesis protein RibD
scnpilot_solids2_trim150_scaffold_33_curated_149
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

168448..169101
DNA (654bp) protein (218aa)
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:EKF20259.1}; EC=2.5.1.9 {ECO:0000313|EMBL:EKF20259.1};; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
PREDICTED: riboflavin synthase-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C151A7
riboflavin synthase, alpha subunit
scnpilot_solids2_trim150_scaffold_33_curated_150
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(169079..169426)
DNA (348bp) protein (116aa)
Putative transcriptional regulator n=1 Tax=Phyllobacterium sp. YR531 RepID=J3CGE3_9RHIZ
Putative transcriptional regulator {ECO:0000313|EMBL:EJN05274.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
ArsR family transcriptional regulator
Displaying items 121-150 of 237 in total

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