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scnpilot_solids2_trim150_scaffold_904_curated

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_904_curated_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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239..1666
DNA (1428bp) protein (476aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11]
Serine--tRNA ligase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HWK8_9RHIZ
scnpilot_solids2_trim150_scaffold_904_curated_2
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1685..2443
DNA (759bp) protein (253aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
surE; stationary phase survival protein SurE; K03787 5'-nucleotidase [EC:3.1.3.5]
stationary phase survival protein SurE n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DF49A7
scnpilot_solids2_trim150_scaffold_904_curated_3
Mesorhizobium sp. L103C565B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2440..3093
DNA (654bp) protein (218aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|RuleBase:RU003802}; EC=2.1.1.77 {ECO:0000256|RuleBase:RU003802};; TaxID=1287094 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C565B0.;"
protein-L-isoaspartate(D-aspartate) O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HBF9_9RHIZ
scnpilot_solids2_trim150_scaffold_904_curated_4
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3200..4738
DNA (1539bp) protein (513aa)
Lipoprotein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FDU7_9RHIZ
Lipoprotein {ECO:0000313|EMBL:CCV14328.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
metalloendopeptidase-like membrane protein
scnpilot_solids2_trim150_scaffold_904_curated_5
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4827..5705)
DNA (879bp) protein (293aa)
ATPase AAA n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FG98_9RHIZ
ATPase AAA {ECO:0000313|EMBL:ESX73223.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
hypothetical protein; K06923
scnpilot_solids2_trim150_scaffold_904_curated_6
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5862..6203
DNA (342bp) protein (114aa)
membrane protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030E6B9C
preprotein translocase, YajC subunit
Membrane protein {ECO:0000313|EMBL:ESY78728.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
scnpilot_solids2_trim150_scaffold_904_curated_7
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6255..8819
DNA (2565bp) protein (855aa)
Protein translocase subunit secD n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11HD5_MESSB
bifunctional preprotein translocase subunit SecD/SecF; K12257 SecD/SecF fusion protein
Protein translocase subunit secD {ECO:0000313|EMBL:ABG63190.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_904_curated_8
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8816..9202
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YD39_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH10511.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein; K09008 hypothetical protein
scnpilot_solids2_trim150_scaffold_904_curated_9
Mesorhizobium sp. LSHC414A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9214..10053
DNA (840bp) protein (280aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HWJ8_9RHIZ
Phytoene synthase {ECO:0000313|EMBL:ESX75765.1}; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC414A00.;"
phytoene/squalene synthetase
scnpilot_solids2_trim150_scaffold_904_curated_10
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10124..11896
DNA (1773bp) protein (591aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P0Y9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF41016.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_904_curated_11
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11897..13303)
DNA (1407bp) protein (469aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAAS00089752}; EC=2.1.1.74 {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAAS00089759};; Folate-dependent tRNA (uracil-5-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; Folate-dependent tRNA(M-5-U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="
gid protein (EC:2.1.1.74); K04094 methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
tRNA (Uracil-5-)-methyltransferase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FG94_9RHIZ
scnpilot_solids2_trim150_scaffold_904_curated_12
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13501..13641)
DNA (141bp) protein (47aa)
Uncharacterized protein n=2 Tax=Nitratireductor RepID=I5C0H0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF41018.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_904_curated_13
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14140..15621
DNA (1482bp) protein (494aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
UPI0003D05CFE related cluster n=1 Tax=unknown RepID=UPI0003D05CFE
trigger factor
scnpilot_solids2_trim150_scaffold_904_curated_14
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15897..16058)
DNA (162bp) protein (54aa)
DNA repair protein radc n=1 Tax=Rhizobium sp. CF080 RepID=J3C238_9RHIZ
DNA repair protein RadC {ECO:0000313|EMBL:EUB95923.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
radC; DNA repair protein RadC; K03630 DNA repair protein RadC
scnpilot_solids2_trim150_scaffold_904_curated_15
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16651..17601
DNA (951bp) protein (317aa)
UPI0003CEB6B4 related cluster n=1 Tax=unknown RepID=UPI0003CEB6B4
Uncharacterized protein {ECO:0000313|EMBL:CDX15096.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
WD repeat protein
scnpilot_solids2_trim150_scaffold_904_curated_16
unknown

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17610..18113
DNA (504bp) protein (168aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_904_curated_17
Pseudomonas sp. M47T1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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18343..19872
DNA (1530bp) protein (510aa)
hypothetical protein n=1 Tax=Pseudomonas sp. CBZ-4 RepID=UPI0003473CD4
Uncharacterized protein {ECO:0000313|EMBL:EIK93209.1}; TaxID=1179778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. M47T1.;"
scnpilot_solids2_trim150_scaffold_904_curated_18
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19937..21166)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07SV8_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ04976.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
scnpilot_solids2_trim150_scaffold_904_curated_19
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21181..22638)
DNA (1458bp) protein (486aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V084_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI53114.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_904_curated_20
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22635..23228)
DNA (594bp) protein (198aa)
UPI0003CE9DA6 related cluster n=1 Tax=unknown RepID=UPI0003CE9DA6
Uncharacterized protein {ECO:0000313|EMBL:ESW77786.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
Displaying 20 items

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