ggKbase home page

scnpilot_solids2_trim150_scaffold_1123_curated_4

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: 3421..4038

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein CspB n=1 Tax=Rhodovulum sp. PH10 RepID=J5PCZ1_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 206.0
  • Bit_score: 267
  • Evalue 1.50e-68
Cold shock protein CspB {ECO:0000313|EMBL:EJW09867.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 206.0
  • Bit_score: 267
  • Evalue 2.10e-68
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 221.0
  • Bit_score: 263
  • Evalue 5.20e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodovulum sp. PH10 → Rhodovulum → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGGGTTCGGATGACGTAACGCAACATGGAGCGCTGCCGCTGATGGTGTCACGGCGATCCGAAATCAGCGATGCCGGCCTTGATATCGCCCCCGGCGATCCGGTCGATATCGTCGTGGTCGCCGGCGCGGTCAAATGGTTCGACGTTGTCAAGGGTTATGGCTTCATCGTGCCCGATGGCGGTGGCGCCGATGTGCTGCTGCACGTCACGGTGCTGCGCCGCGACGGCTTCCAGACCGCGCATGAAGGCGCCCGGATCGTGTGCGAGGCGCTCGAGCGCTCGCGCGGCCTGCAAGCCTTCCGCATCCTGTCCATGGATGACAGCAAGGCGGTGCATCCCTCGCAGGCGCCCTCGCGCACCAACCTCACCGTCACGCCGACCAGCGGCCTCGAGCAGGCGACGGTGAAGTGGTTCAACCGGCTGCGCGGCTTCGGCTTCCTGACCCAGGGCGAAGGCAAGCCCGACATTTTCGTGCATATGGAAACCCTGCGCCGCTACGGTTTGGCGGAACTCAAGCCCGGTGATACAGTGCTGGTGCGTTATGGGCCCGGCGTGAAGGGCCTGATGGCGGCCGAGGTCCGGCCGCTCGGCGGCGACAAGTTGCCGTCGTCACACTGA
PROTEIN sequence
Length: 206
MGSDDVTQHGALPLMVSRRSEISDAGLDIAPGDPVDIVVVAGAVKWFDVVKGYGFIVPDGGGADVLLHVTVLRRDGFQTAHEGARIVCEALERSRGLQAFRILSMDDSKAVHPSQAPSRTNLTVTPTSGLEQATVKWFNRLRGFGFLTQGEGKPDIFVHMETLRRYGLAELKPGDTVLVRYGPGVKGLMAAEVRPLGGDKLPSSH*