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scnpilot_solids2_trim150_scaffold_1123_curated_20

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: 17611..18483

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcription regulator protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IXG8_HERSS similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 281.0
  • Bit_score: 327
  • Evalue 1.30e-86
LysR family transcription regulator protein similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 281.0
  • Bit_score: 327
  • Evalue 4.10e-87
LysR family transcription regulator protein {ECO:0000313|EMBL:ADJ62043.1}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 281.0
  • Bit_score: 327
  • Evalue 1.90e-86

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Taxonomy

Herbaspirillum seropedicae → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 873
ATGACCAACGGTATTCGCATGCTCAATCCGCTCTGGCTGAGAACCTTCGTCACCGCCGCCGAATTGGTCAGCTTCACCCAGGCCGGCCGCCGCCTCGGCCTGACGCAATCGACGGTCAGCGATCATGTCGCGCGGCTTGAAGCGCAGCTCGGCCGCCGCCTGTTCGTGCGCGACACGCATTCGCTGGCGCTGACCAGCGACGGCGCCAGCCTGCTGATCCATGCCCGCCTGATCCTCGATGCCCATGCCCGCGCCGAATTGCAGTTCACCGGCCCGACCTTGCGCGGACATATCCGCCTCGGCACCTCGGACGACATGGCGCTCGGGCCGCTGCCGGTCGCGCTCGCGCGTTTCAAGCGGCTCTACCCGGAGGTCGATCTCGACCTGACCGTCGGCTTCACCGACATGCTGCGTCCGCTGCTCGATGCCGGCCAGCTCGACATCATCACCGGCAAGCGGCGCGAGGGCGAGCCGCAAGGCCAGACGCTCTATCGCGAGCCGCTCGTCTGGTTCGGCTATGAGGGCATGGTGCTCGATGACGGGCCGCTGCCGCTCGCCATGCTGGCCGAGCCGAGCATCACGCGCGCCCAGACGCTGGACGCACTCGCCCGCGCCGGGCGCAACTGGCGCATCACCTGCAACTCGTCCGGCTATACCGGCTGCGCGGCGGCTGTGCGCGCCGGGCTCGGCATCACCGCCCTGCCCGAGCAGATGCGCTTTGCCGGGCTCGTGCCATTGCGCGGCCTGCCGGCCCTGCCCGAGATCGAATATATCGCGCTGACCGCGCGCAATGCCGGCCGCCCGGTGCAGGCGCTGCTGAAAATCCTGCTCGAGAGCGACCTGTCGCAAGCGGGCCGCACCGCTTGGCGTTAG
PROTEIN sequence
Length: 291
MTNGIRMLNPLWLRTFVTAAELVSFTQAGRRLGLTQSTVSDHVARLEAQLGRRLFVRDTHSLALTSDGASLLIHARLILDAHARAELQFTGPTLRGHIRLGTSDDMALGPLPVALARFKRLYPEVDLDLTVGFTDMLRPLLDAGQLDIITGKRREGEPQGQTLYREPLVWFGYEGMVLDDGPLPLAMLAEPSITRAQTLDALARAGRNWRITCNSSGYTGCAAAVRAGLGITALPEQMRFAGLVPLRGLPALPEIEYIALTARNAGRPVQALLKILLESDLSQAGRTAWR*