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scnpilot_solids2_trim150_scaffold_1688_curated_5

Organism: solids_Rhodanobacter_2

partial RP 29 / 55 BSCG 27 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(3416..3907)

Top 3 Functional Annotations

Value Algorithm Source
S-ribosylhomocysteine lyase {ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|SAAS:SAAS00059628};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 160.0
  • Bit_score: 266
  • Evalue 2.90e-68
LuxS protein involved in autoinducer AI2 synthesis n=1 Tax=Rhodanobacter denitrificans RepID=M4NKU1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 160.0
  • Bit_score: 266
  • Evalue 2.00e-68
LuxS protein involved in autoinducer AI2 synthesis similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 160.0
  • Bit_score: 266
  • Evalue 6.40e-69

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
GTGAACGCCGTGATTGATCTGGAAAACCTGGGCTGGGCCGTCGGCACCGTCGGCGAACTGGATCATCGCCGCCTGAGGGCGCCCAGCGTGAAGCTGCGCGGTGCGCACGTCGGCCAGCACGGCGACGTGGTCTACACCATCGACCTGCGCTGGCGCCTGCCCAATGCCGACGCTTGCCTGAGCACCGTCGAGCTGCATTCGCTGGAGCACTTCCTGCTGGAAGGTTTCGGCCGCCTGCTGCCGGCGCATTTCATCGGCGTCGGCGTGATGGGCTGCCAGACCGGCTTCTACCTCACGCTGTTGAACGAGGGCCGCCGCGCGGTGATCGAACAGGCGCTGGAGGCCGTGCTGTACGGCGTGCTCGGTGCCACCGCCGTGCCCTACGCGCGCATCGAGCAGTGCGGCCACTGGCGCCACCACGACCTGGCTGCCGCGCAGGCGGTGGCCCGCGAGGTGCTGGCGCGGCGCGCGGCGTGGGGAGAGGTCGCATGA
PROTEIN sequence
Length: 164
VNAVIDLENLGWAVGTVGELDHRRLRAPSVKLRGAHVGQHGDVVYTIDLRWRLPNADACLSTVELHSLEHFLLEGFGRLLPAHFIGVGVMGCQTGFYLTLLNEGRRAVIEQALEAVLYGVLGATAVPYARIEQCGHWRHHDLAAAQAVAREVLARRAAWGEVA*