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scnpilot_solids2_trim150_scaffold_4997_curated_14

Organism: solids_Rhodanobacter_2

partial RP 29 / 55 BSCG 27 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 12477..13304

Top 3 Functional Annotations

Value Algorithm Source
formamidopyrimidine-DNA glycosylase Fpg (EC:4.2.99.18) similarity KEGG
DB: KEGG
  • Identity: 89.5
  • Coverage: 275.0
  • Bit_score: 513
  • Evalue 5.10e-143
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.5
  • Coverage: 275.0
  • Bit_score: 513
  • Evalue 1.70e-142
Formamidopyrimidine-DNA glycosylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WJM4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 275.0
  • Bit_score: 514
  • Evalue 5.50e-143

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGCCCGAATTGCCTGAAGTCGAAACCACCCGTCGCGGCATCGCGCCGTATCTGATCGGCCGGCGTGTCAGCGGCGTCACCTTGCGCCGGCCAGACCTGCGCTGGCCGATTCCGCCGGAGATCAGCACGCTGCTGCCCGGCCAGCGCATCGACGCGGTGGAACGGCGCGCGAAGTACCTGCTGCTGCACACCGCCGCCGGCAGTGCGCTGCTGCACCTGGGCATGAGCGGCGTGCTGCGCGTGCTGCCGCCGGACGCGCCGGTGGGCAAGCACGATCATGTCGACATCGCGCTGGAGCGCAGTACCGCGCAGGCACCGCGCATCCTGCGCTTCACCGACCCGCGCCGCTTCGGTTGCCTGCTGTGGCAAGCGCCGGGCACCACGCACGAACTGCTGGCCCACCTCGGCCCCGAACCGCTGACCGACGCCTTCGACGGGGAGCTGCTGTGGCGCCGCTCGCGCGGGCGCACGGCGGCGGTGAAACTGTTCCTGATGGACAACGCGATCGTGGTCGGCGTGGGCAACATCTACGCCAGCGAGGCGCTGTTCCGCACCGGCATCGACCCGCGCCGCGCCGCGGGCAGCGTGTCGCGGGCGCGCTACGCGCGATTGGCGTCGGAAGTGAAGCAGTTGCTGGCGTGGGCGATCGAACGCGGCGGCACCACCTTGCGCGACTTCCTCAACCCCGACGGGGCACCGGGTTATTTCTTCCGCGAGCTGATGGTCTACGGCCGCGCCGGCGAACCGTGCCGGGTCTGCGGCAGCGCCATCCGGCAGGCCGTGCTGGGCCAGCGCTCGACCTTCTGGTGCCCGCGCTGCCAGCGCTGA
PROTEIN sequence
Length: 276
MPELPEVETTRRGIAPYLIGRRVSGVTLRRPDLRWPIPPEISTLLPGQRIDAVERRAKYLLLHTAAGSALLHLGMSGVLRVLPPDAPVGKHDHVDIALERSTAQAPRILRFTDPRRFGCLLWQAPGTTHELLAHLGPEPLTDAFDGELLWRRSRGRTAAVKLFLMDNAIVVGVGNIYASEALFRTGIDPRRAAGSVSRARYARLASEVKQLLAWAIERGGTTLRDFLNPDGAPGYFFRELMVYGRAGEPCRVCGSAIRQAVLGQRSTFWCPRCQR*