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scnpilot_solids2_trim150_scaffold_4733_curated_3

Organism: solids_Rhodanobacter_2

partial RP 29 / 55 BSCG 27 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 1211..2041

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 276.0
  • Bit_score: 450
  • Evalue 1.80e-123
shikimate dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 276.0
  • Bit_score: 436
  • Evalue 6.00e-120
Shikimate dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUD9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 80.1
  • Coverage: 276.0
  • Bit_score: 450
  • Evalue 1.30e-123

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 831
ATGCAGCCCGCCCAGTTCGCCGTGTTCGGCCATCCGATCAGCCACAGCTTGTCGCCGGCGATCCACCAGGCGTTCGCGCGGCAGTTCGGCGTCGAGCTGGCATACCGCGCCATCGACGTGGCGCCGGTCGACTTCGCCGAGACGGTGCGGCGTTTCTTCGCCGAGGGCGGGCGCGGCGCCAACGTCACCCTGCCGCACAAGGCGGCCGCGTTCGCGTTGGCCGACCAGCACAGCGTCGCGGCCACGCGCGCCGGTACCGCCAACGTGCTGACCCGGCTGGACGAGGGCCGCCTGGCCGCGCACAACACCGACGGCGACGGCATGGTGCGCGACCTGGCCGAACGCCACGAGATCGACCTGCGCGGCCATGACACCTTGCTGCTCGGTGCCGGCGGCGCCGCGCGCGGGGTGGCCTGGCCGCTGCTCGATGCCGGCGTGCGGTCGCTGACCATCGTCAACCGTTCGCCGGCGGCGGCCGACGCGCTGGCCGACGCCATTGGCGAGCCGGCGCGGGTGCGCACCCGCTACTGGGACGACCTGGCCACCATCGGCAGCTTCGACCTGATCGTCAACGCCACCTCGGCCGGCGTGCTGGGTGCGGCACTGCAACTGCCGTTCACCCTGCTCGGCAATCGCGCGGTGTGCTACGACCTGTCCTACGGCCAGGCCGCCGCGGGTTTCCTCGACTGGGCCCGGGCGGGCGGCGCGCGCCATGCCTGCGATGGCCTCGGCATGCTGGTGGAAACCGCGGCCGACGCCTTCGCGCTGTGGCACGGCCAGCGACCGGACACCGAGCCGGTGTACCAGACCTTGCGCCGGCAAACGGCCTGA
PROTEIN sequence
Length: 277
MQPAQFAVFGHPISHSLSPAIHQAFARQFGVELAYRAIDVAPVDFAETVRRFFAEGGRGANVTLPHKAAAFALADQHSVAATRAGTANVLTRLDEGRLAAHNTDGDGMVRDLAERHEIDLRGHDTLLLGAGGAARGVAWPLLDAGVRSLTIVNRSPAAADALADAIGEPARVRTRYWDDLATIGSFDLIVNATSAGVLGAALQLPFTLLGNRAVCYDLSYGQAAAGFLDWARAGGARHACDGLGMLVETAADAFALWHGQRPDTEPVYQTLRRQTA*