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scnpilot_solids2_trim150_scaffold_3676_curated_4

Organism: solids_Rhodanobacter_2

partial RP 29 / 55 BSCG 27 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(2651..3430)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Nevskia ramosa RepID=UPI0003B5FCC2 similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 254.0
  • Bit_score: 339
  • Evalue 2.30e-90
Periplasmic binding protein {ECO:0000313|EMBL:EIT70015.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.9
  • Coverage: 252.0
  • Bit_score: 318
  • Evalue 7.70e-84
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 258.0
  • Bit_score: 274
  • Evalue 4.90e-71

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Taxonomy

Hydrocarboniphaga effusa → Hydrocarboniphaga → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 780
ATGCGCATCTTTTCCCACACCTGCTCCAACACCGAGATCGTCTGCGCGCTCGGCTGCGCCGACCGGCTGGTCGGCGTGGATGCCGATTCCGACTACCCGCCCGACGTGGTGGCGCAGTTGCCCAGCACCGGGCGCGATCTGGATCTGGACGTGGGGGCAGTGCAAGCGCTGGAGCCGGATCTGGTGCTGACTTCGCTGACCGTGCCCGGGCATGAGCAGGTGGTCGACGCACTGCACTCGGCGGGACTGGCCACCCTGGTGTGCGATCCGCAGTCGCTGGAGGACGTGTACGCGGATATCCGGCGCATCGCCAGCGCGCTGGGCGTGGCCGAGCGCGGCGCGGCGCTGGTGGCGTCGATGCGCGCGGCGATGCCGGCAGTGGAGCCGGCGTCCGCGCGTCCGCGCGTACTGGTGGAGTGGTGGCCCAAGCCGGTGATCGCGGTGGCCCGGCATTCCTGGGTGAACGACATCATCCAACTGGCCGGCGGCATCAATCCGTGGGGCGAAGTGGACGCCAAGAGCGTGCCGCTGGAGTACGCCGACGCGGCGGCCGAGCGCCCCGACATCGTGGCGATGAGCTGGTGCGGCGTGAAGGTCGAGAACTATCGCGCCGACAAGGTGCGCGCGCGCCCGGACTGGGCCGACGTGCCGGCGGTGCGCCGCGACCGCATCCACGCGATCAGCGAGGCCTACCTCGGCCGGCCCGGGCCAAGGCTGGTCGAGGGTTATCGGCAGTTGCGCGCCGCCATCGCGGCGGCCGGTTCCCCGGCGATGCCATGA
PROTEIN sequence
Length: 260
MRIFSHTCSNTEIVCALGCADRLVGVDADSDYPPDVVAQLPSTGRDLDLDVGAVQALEPDLVLTSLTVPGHEQVVDALHSAGLATLVCDPQSLEDVYADIRRIASALGVAERGAALVASMRAAMPAVEPASARPRVLVEWWPKPVIAVARHSWVNDIIQLAGGINPWGEVDAKSVPLEYADAAAERPDIVAMSWCGVKVENYRADKVRARPDWADVPAVRRDRIHAISEAYLGRPGPRLVEGYRQLRAAIAAAGSPAMP*