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scnpilot_solids2_trim150_scaffold_3813_curated_1

Organism: solids_Rhodanobacter_2

partial RP 29 / 55 BSCG 27 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(3..746)

Top 3 Functional Annotations

Value Algorithm Source
General secretion pathway protein D n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W358_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 74.6
  • Coverage: 248.0
  • Bit_score: 364
  • Evalue 6.40e-98
General secretion pathway protein D {ECO:0000313|EMBL:EIL93899.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 248.0
  • Bit_score: 364
  • Evalue 8.90e-98
general secretion pathway protein D similarity KEGG
DB: KEGG
  • Identity: 72.8
  • Coverage: 250.0
  • Bit_score: 351
  • Evalue 2.30e-94

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 744
ATGCCTCGCCCATTCCTCATGCGCAGCGTGCGCACCGCCACCCTGGCCACCGTGGTCGCGCTCGCCGGCTGCGCCAGCCTGCCGCAACCGCGCGACGACGGCGCCCTGCAACGCGAAGCGATGGCCGGCACGCACGACCCGGTGCCCGCGCCGCTGCCGCTCAACCGCGACCTGGCCGCGCCCACCGCCGCGCCGCCGGCGGCCACCATCAGCACCGGCAGCGGCCAGTTCGTGCGGCCCACCGCGCTGGTCACGCCGCGCAAGACGGCCGCCGGCAAGGATGCGGTCACCTTCAATTTCGAGAACCAGCCGGTGCAGGCGGTGGTCAAGGCCATCCTCGGCGACCTGCTCAAGCAGAACTACACCATCGTGCCGGGCGTGGAAGGCAACATCTCCTTCTCCACCGCCGCGCCGGTCGAGCAGGAGCAGGCGCTGCCGATCCTGGAAACCCTGCTGGGCTGGACCAACAACGCCCTGGTCCGGCGCGCCGGTGGCTATGTGGTGATGCCGGCGAAGGACGCCGTGGCCGGCAACCTGGTACCCAGCCTCGGCGCGGCCGCGCCCGGCGGCGGCCTGCAGGCGCGGCTGTTCCCGCTGCGCTACATCTCCGCTACCGAGATGCAGAAGCTGGTCAAGCCGTTCGTGCGCAAGGACGCGGTGCTGCTGGTCGATCCCTCGCGCAACCTGATCGTGCTGGCCGGCACGCCGCAGGAGCTGGCCGACGACGAGCGCATGATCCGCACC
PROTEIN sequence
Length: 248
MPRPFLMRSVRTATLATVVALAGCASLPQPRDDGALQREAMAGTHDPVPAPLPLNRDLAAPTAAPPAATISTGSGQFVRPTALVTPRKTAAGKDAVTFNFENQPVQAVVKAILGDLLKQNYTIVPGVEGNISFSTAAPVEQEQALPILETLLGWTNNALVRRAGGYVVMPAKDAVAGNLVPSLGAAAPGGGLQARLFPLRYISATEMQKLVKPFVRKDAVLLVDPSRNLIVLAGTPQELADDERMIRT