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scnpilot_solids2_trim150_scaffold_354_curated

Search features with annotation key words

Displaying items 31-53 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_354_curated_31
unknown

Not on your lists

comp(44764..44892)
DNA (129bp) protein (43aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_354_curated_32
unknown

Not on your lists

45254..45373
DNA (120bp) protein (40aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_354_curated_33
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(45437..46261)
DNA (825bp) protein (275aa)
Beta-lactamase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YAN3_9SPHI
Beta-lactamase {ECO:0000313|EMBL:EHQ29153.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
beta-lactamase
scnpilot_solids2_trim150_scaffold_354_curated_34
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(46319..47287)
DNA (969bp) protein (323aa)
cytochrome C n=1 Tax=Niabella aurantiaca RepID=UPI0003624010
Cytochrome C {ECO:0000313|EMBL:AHF16042.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
cytochrome c-like protein
scnpilot_solids2_trim150_scaffold_354_curated_35
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

47588..48217
DNA (630bp) protein (210aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
Superoxide dismutase [Cu-Zn] n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KML9_SOLCM
Cu/Zn superoxide dismutase
scnpilot_solids2_trim150_scaffold_354_curated_36
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(48303..49658)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GRU5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH56623.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_354_curated_37
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(49753..51063)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE27_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03575.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_354_curated_38
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(51104..52048)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003815188
Fe(3+)-transporting ATPase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_354_curated_39
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(52246..53829)
DNA (1584bp) protein (528aa)
Monooxygenase FAD-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE30_NIAKG
monooxygenase FAD-binding protein; K07137
Monooxygenase FAD-binding protein {ECO:0000313|EMBL:AEW03578.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_354_curated_40
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(53882..54379)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003681497
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_354_curated_41
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

54966..56399
DNA (1434bp) protein (478aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THJ8_NIAKG
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein
scnpilot_solids2_trim150_scaffold_354_curated_42
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

56478..56753
DNA (276bp) protein (92aa)
Acylphosphatase {ECO:0000256|RuleBase:RU000553, ECO:0000256|SAAS:SAAS00255930}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7]
Acylphosphatase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PI51_CHIPD
scnpilot_solids2_trim150_scaffold_354_curated_43
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

57232..58413
DNA (1182bp) protein (394aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KIC91774.1}; EC=2.3.1.9 {ECO:0000313|EMBL:KIC91774.1};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6U9_NIAKG
scnpilot_solids2_trim150_scaffold_354_curated_44
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(58681..59028)
DNA (348bp) protein (116aa)
Single-stranded DNA-binding protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C2X3_9FLAO
single-strand binding protein; K03111 single-strand DNA-binding protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_354_curated_45
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

59315..59701
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036A2FB5
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_354_curated_46
unknown

Not on your lists

comp(59642..59755)
DNA (114bp) protein (38aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_354_curated_47
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

59794..60057
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SAC3_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY51500.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_solids2_trim150_scaffold_354_curated_48
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

60054..60476
DNA (423bp) protein (141aa)
PilT domain-containing protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NKN4_9SPHI
Twitching motility protein PilT {ECO:0000313|EMBL:AHF14627.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_354_curated_49
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(60589..61242)
DNA (654bp) protein (218aa)
leucyl/phenylalanyl-tRNA--protein transferase; K00684 leucyl/phenylalanyl-tRNA--protein transferase [EC:2.3.2.6]
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 1762
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TD83_NIAKG
scnpilot_solids2_trim150_scaffold_354_curated_50
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

61375..61938
DNA (564bp) protein (188aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFC8_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEV97338.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_354_curated_51
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

61925..63424
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFC9_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97339.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_354_curated_52
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

63553..64455
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFD0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97340.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_354_curated_53
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

64468..65064
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFD1_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97341.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 31-53 of 53 in total

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