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scnpilot_solids2_trim150_scaffold_235_curated_1

Organism: solids_Sphingobacteriales_3

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 2..916

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase Rsu; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 308.0
  • Bit_score: 383
  • Evalue 8.70e-104
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 308.0
  • Bit_score: 383
  • Evalue 3.90e-103
Pseudouridine synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRT1_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 60.7
  • Coverage: 308.0
  • Bit_score: 383
  • Evalue 2.80e-103

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 915
CATTCCGCAGATAAAAGGGATGGTACAGGGTACAAGGTACAGGGTGCAGGGTACAAGGTGGAGAGCAACGGGTTGAGGGTTGAGCGTAAAAAAAGCGAAACGCCACAAAGGAATGCTGCCGGAATACGGAAAGCAGGAAACAAGCAGCAGACAGCCGGATCTCAAATCTCAAATCCGGAAATGCCGCTGAACAAGTTTATAGCGTGGAGCGGCGTTTGCAGCAGGCGTGAAGCTGCCGACCTGATCAAAGCCGGCAAAGTAATCGTAAACAACCAGGTAGTTACCGAGCCGCCTTTCAGGGTAAGTCAAAGCGACAGCATAAAAGTAAACGGCAAAAAAATAACCATACAAAAAAACCTGGTCTACATTCTTCTTAATAAACCCAAGGATTATATTACCACCACCGATGATCCCGAAGGACGTAAAACAGTAATGGACCTGGTTAAACGTGCAACGGAGGAAAGAGTATTCCCGGTAGGACGCTTAGACAGGAATACAACCGGTGTGCTGCTTATTACCAATGACGGCGAATTGGCCCAGCGTCTTACACACCCAAAATATGAAGTGAAAAAAATTTACGAAGTGCATGTAGACAAGCCCGTTACCAAACAGCAGTTGGATAAAATTGCAAGCGGCATTACGCTGGAAGACGGATTCATTCAACCGGATGCCATAGCCTATGCAGATGCAAATGATAAAAGCATTGTGGGCATAGAAATTCACAGTGGGCGAAACAGGATCGTAAGGCGCATTTTTGAACACCTTGGATTTAAAGTAAAAAATCTCGACAGGGTGATGTACGGCATCTTTACCAAAAAAAATGTAGAAAGGGGCAAATGGCGCCTGTTAACGGAAAAAGAGATCCGTTTACTAAAACACCTGAATACTTCTTTCGCTAATAAAAAATCTTCCTGA
PROTEIN sequence
Length: 305
HSADKRDGTGYKVQGAGYKVESNGLRVERKKSETPQRNAAGIRKAGNKQQTAGSQISNPEMPLNKFIAWSGVCSRREAADLIKAGKVIVNNQVVTEPPFRVSQSDSIKVNGKKITIQKNLVYILLNKPKDYITTTDDPEGRKTVMDLVKRATEERVFPVGRLDRNTTGVLLITNDGELAQRLTHPKYEVKKIYEVHVDKPVTKQQLDKIASGITLEDGFIQPDAIAYADANDKSIVGIEIHSGRNRIVRRIFEHLGFKVKNLDRVMYGIFTKKNVERGKWRLLTEKEIRLLKHLNTSFANKKSS*