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scnpilot_solids2_trim150_scaffold_235_curated_2

Organism: solids_Sphingobacteriales_3

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 924..1646

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 237.0
  • Bit_score: 305
  • Evalue 1.10e-80
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 237.0
  • Bit_score: 305
  • Evalue 4.80e-80
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035C1355 similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 233.0
  • Bit_score: 307
  • Evalue 1.50e-80

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 723
GTGCAAAAACCAAAACCGGAAATTATTTTCGAAAACGATGCTTTTGTGGCGGTCAACAAACCATCCGGACTATTGTCGGTGCCCGACAGGGAAGGAACAGAAATTGCCCTGAAACAATTGTTGCAACAGCAATACGGACAAATCTGGACGGTGCATCGCTTAGATAAGGATACCAGCGGGGTTATTGTATTTGCAAAAGACGAGATCACCCATAAGTTTTTATCAAAACTCTTCGAAGGAAGAGAGGTAGAAAAATACTATACCGGACTTGTACTTGGTGTTCCTTCTGTGGAAAGCGGTTCAGTTGATGCATCCATTATGGAACATCCTGTAAAAAAAGGGTTAATGGTAACCAATAAAAAAGGCAAATCCGCCCTTACCGATTTCACTCGCTTAGAAAGCTTCGGCAAATTCTCGCTGATGAGGTTTCGCATACATACGGGGCGCACCCACCAGATACGGGTGCACATGAAACACATTGGGCACCCCATCGTATGTGATCCACTGTATGGAAACGGTGAACCGGTAATGCTGTCATCCATCAAGAAGAAATTCAATCTTTCAAAAAAAGAAGAAGAAGAAAAACCATTGTTTAACCGGCTTGCATTGCATGCCGAAAGATTGCAATTCACGGATGCCAAAAAGCAAAAGCATACCATAGAAGCGCCGCTTCCCAAAGACATGCGGGCTTTGCTGCAACAGTTAAGGAAATGGAAAAGCTGA
PROTEIN sequence
Length: 241
VQKPKPEIIFENDAFVAVNKPSGLLSVPDREGTEIALKQLLQQQYGQIWTVHRLDKDTSGVIVFAKDEITHKFLSKLFEGREVEKYYTGLVLGVPSVESGSVDASIMEHPVKKGLMVTNKKGKSALTDFTRLESFGKFSLMRFRIHTGRTHQIRVHMKHIGHPIVCDPLYGNGEPVMLSSIKKKFNLSKKEEEEKPLFNRLALHAERLQFTDAKKQKHTIEAPLPKDMRALLQQLRKWKS*