ggKbase home page

sw_11_scaffold_499

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
sw_11_scaffold_499_1
unknown

Not on your lists

1..150
-----------------
DNA (150bp)
protein (50aa)

This feature has no annotations

sw_11_scaffold_499_2
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(223..3579)
-----------------
DNA (3357bp)
protein (1119aa)
BNR/Asp-box repeat protein id=4523920 bin=GWF2_Bacteroidetes_38_335 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
BNR/Asp-box repeat-containing protein
sw_11_scaffold_499_3
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3670..4458)
-----------------
DNA (789bp)
protein (263aa)
lipA; lipoyl synthase (EC:2.8.1.8)
Lipoyl synthase n=2 Tax=Saprospira grandis RepID=H6LAX0_SAPGL
sw_11_scaffold_499_4
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4473..5282)
-----------------
DNA (810bp)
protein (270aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PC78_CHIPD
hypothetical protein
sw_11_scaffold_499_5
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5416..7806)
-----------------
DNA (2391bp)
protein (797aa)
TonB-dependent receptor plug n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KX71_HALH1
TonB-dependent receptor plug
sw_11_scaffold_499_6
Mariniradius saccharolyticus, Mariniradius, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8275..9192
-----------------
DNA (918bp)
protein (306aa)
Transcriptional regulator, MerR family n=1 Tax=Mariniradius saccharolyticus AK6 RepID=M7YAS1_9BACT
regulatory protein MerR
sw_11_scaffold_499_7
unknown

Not on your lists

comp(9425..9556)
-----------------
DNA (132bp)
protein (44aa)

This feature has no annotations

sw_11_scaffold_499_8
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10115..10615
-----------------
DNA (501bp)
protein (167aa)
RNA polymerase, sigma-24 subunit, ECF subfamily protein n=2 Tax=Saprospira grandis RepID=H6L9Z2_SAPGL
rpoE; ECF subfamily protein RNA polymerase sigma-24 subunit
sw_11_scaffold_499_9
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10718..11101)
-----------------
DNA (384bp)
protein (128aa)
hypothetical protein AtheD1_13790 id=3691677 bin=GWF2_Bacteroidetes_33_16 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
sw_11_scaffold_499_10
GWF1_Flavobacteria_32_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11234..11674
-----------------
DNA (441bp)
protein (147aa)
Uncharacterized protein id=2606703 bin=GWF1_Flavobacteria_32_7 species=Flavobacterium indicum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
hypothetical protein
sw_11_scaffold_499_11
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11703..12191)
-----------------
DNA (489bp)
protein (163aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI000374B49B
hypothetical protein
sw_11_scaffold_499_12
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12296..12622)
-----------------
DNA (327bp)
protein (109aa)
Na(+)/drug antiporter n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N820_9BACT
multidrug transporter
Displaying 12 items

View Taxonomy