ggKbase home page

sw_11_scaffold_328_13

Organism: SW_11_Bacteroidetes_45_7

near complete RP 48 / 55 MC: 2 BSCG 41 / 51 MC: 1 ASCG 6 / 38 MC: 2
Location: 13198..13722

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor rpoD n=1 Tax=Lewinella cohaerens RepID=UPI000376A5F4 similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 174.0
  • Bit_score: 314
  • Evalue 6.90e-83
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:KIF22446.1}; TaxID=1574475 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montana BDHKU21 similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 174.0
  • Bit_score: 310
  • Evalue 1.80e-81
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 92.0
  • Coverage: 174.0
  • Bit_score: 309
  • Evalue 6.30e-82

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Aphanocapsa montana → Aphanocapsa → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 525
ATGAGGCAACTAAAAATCACCAAATCCATCACTAATCGTGAAAGCCAATCACTTGATAAGTATTTGCAGGAAATTGGCAAAGTTGATTTACTTACCCCGGAAGAAGAAGTAGAATTGGCAAAACGGATCAAAGAGGGTGATCAAGTTGCTCTTGAACGTTTAACAAAAGCTAACCTTCGTTTTGTGGTGTCCGTTGCCAAGCAATATCAAAACCAGGGGCTCTCCTTAAGTGATTTAATCAACGAAGGCAATCTTGGATTAATTAAAGCCGCTCAACGTTTTGATGAAACCCGTGGCTTTAAGTTTATCTCTTATGCGGTTTGGTGGATACGGCAATCCATTCTGCAGGCATTAGCAGAGCAATCCCGCATTGTACGCCTTCCACTCAACAAAGTTGGGTCCTTAAATAAGATCAATAAAGCGTTTTCCCATTTAGAGCAAGAGTACGAGCGCGAGCCCTCTTCGGAGGAACTGGCCGACAACTTAGAAATTAATTCAAGTGAAGTGCAAACCACCCTTTCTTGA
PROTEIN sequence
Length: 175
MRQLKITKSITNRESQSLDKYLQEIGKVDLLTPEEEVELAKRIKEGDQVALERLTKANLRFVVSVAKQYQNQGLSLSDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAEQSRIVRLPLNKVGSLNKINKAFSHLEQEYEREPSSEELADNLEINSSEVQTTLS*