ggKbase home page
Advanced Search
Search Help

sw_4_scaffold_54_22

Organism: SW_4_Oscillatoriophycideae_48_29

near complete RP 48 / 55 MC: 2 BSCG 49 / 51 ASCG 11 / 38
Location: 20985..24989

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01324}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01324};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01324};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 999.99
  • Bit_score: 1889
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 999.99
  • Bit_score: 1809
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5DH14_9CHRO similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 999.99
  • Bit_score: 1889
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rubidibacter lacunae → Rubidibacter → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 4005
ATGACCGACGAGAAACCAATGACAAAAGAACAAGAAGCAACTTTTTTCAACCAGGTTGTCGATAAAGGTCAGCTTAAAAACCTGATCGCTTGGGCTTTTACCAACTTCGGTAGCGCACGCTGCTCGGCAATGGCAGACCAACTCAAGGACATGGGGTTCCACTACGCGACAAAAGCGGGAGTCTCGATTAGCGTGGAAGACCTGCAAGTGCCGCCTGGTAAACGCCAGATGCTCGATCAAGCCGAAGCAGAGATCAATGCCACTGAAGACCGCTACCGCACCGGAAAAATTACCGAAGTAGAGCGGTTTCAGAAAGTGATTGACACTTGGAACAGTACTTCGGAAGCGCTTAAAGACGAGGTGGTACGCAACTTCCAAGCCACAGATCCACTTAACTCAGTATACATGATGTCTCAGAGTGGTGCGAGGGGCAATCTTTCCCAGGTGCGCCAGCTGGTAGGAATGCGTGGTCTGATGGCAGACCCACAGGGGGAAATTATTGACCTACCGATTAAGACTAACTTTCGGGAAGGCTTAACCGTAACGGAATACATCATTTCCTCTTATGGTGCCCGCAAGGGTTTGGTGGACACTGCCCTGCGAACCGCAGACTCGGGGTATCTCACGCGACGACTAGTAGACGTTTCCCAAGACGTGATTGTACGCGAGTTCGATTGCGGTACCCAGCGCAGCATTTCCTTGACAAGTATGAGCGATGGGGAAACAACCCTGATTCCCCTATCTGACCGCCTGTTTGGTCGGGTGCTGGCACAAGACGTGAGTGACCCTAACACAGGGGAAATAATCGCCCAACGCAATCAAAGTGTGGACGATCCACTCTCGAAGAAAATTGCGGCGGTTGTAGAGGAAGTGAAGGTGCGATCGCCCCTGACCTGCGAAGCAGCGCGTTCGGTCTGTCAGCACTGCTATGGCTGGAGTTTGGCTCACAATCGCCCAGTCGATCTCGGGGAAGCTGCGGGAATTATTGCTGCCCAGTCAATTGGGGAACCAGGCACTCAGCTCACCATGCGGACTTTCCACACCGGTGGCGTTTTCACTGGCGAGGTCGCACGGCAGGTGCGGGCACCCTCAGAGGGAACGGTTAGCCTATCTCAGCAGCTGCGCACGCGGATGGTACGAACTCGCCACGGCGACGAACGCGAACAAGTCGAGGTAGCAGGCGAACTCATCCTCTCACCCAGTGAAAGTGGCAGTCCTGCTCAGAACTTTTCTGTCACCCCTGGCTCCCTCCTGCTAGTCAAAGATGGAGAAACTGTCAGCGCCGGGCAACTGCTAGCAGAAGTGGCAATGGCGAAACCGCAACGTTCCACAGAGCGGGCAGTCAAAGACGTTTCCACTGACTTGGCTGGGGAAGTGCTGTTTGACAGCCTGCTACCCGAAGAAAAGACTGACCGCCAAGGCAACATGACGCGCATTGCCCAGCGCAGTGGTTTAATGTGGGTTCTCTCGGGTGAGGTCTACAACCTCTTGCCTGGGGCAGAACCCGAGGTAAAAAACGGTGAGAAGGTGGAGCCAGGAAGTGTGCTGGCAGAAACCAAGTTGGCATCCACCGGCGGCGGCGTGGTGCGCCTCCGGGATCAGGATGAGAGCCGGCGCGAGATCGAAATTATCACCGCTTCGGTGCGGTTAGCCCAAGCCGGGATTCATCGCGATCGCAGTGGAACCAGGGAGCAATATATCCTTCACACCGCCAATAATCAGCGCTTTGCTCTCAAAGCCGCTCCCGGAACGAAAGTGCAAAACAACCAGGTCATTGCCGAGCTGATCGACGACCGCTACCACACTCAAACCGGCGGAACGATCAAATACGCTGGGGTAGATATCGATAAACGCGGCAAAGCTAAGCAAGGTTACGAAGTTACCCAAGGTGGAACCCTGCTGTGGATTCCCGAGGAATGCCACGAAGTCAACAAAGATATTTCGCTGCTGCTGGTAGACGAGGGACAGTACGTTGAAGCCGGAACCGAAGTAGTCAAAGATATCTTCTGCCAGTCTTCCGGCGTAGTGGAAGTGGTGCAGAAAAACGACATTCTGCGCGAAATTATCATTAAGCCTGGAGAACTGCACCTCAGTGAGGAACCGCCGAAATCGGGTGTCGATCAAATTGTCAATCCCGGAGAGGAAGTAATTTCTGGCGTAGAAGTCTCCGAATTACGCTATGCCGAGTACATCGATACTTCCGAAGGGAAAGCCGTGTTCCTGAGACCCGTCACCGAATACAGGGTTCCAGACCAGCCGGATGTCCCCTCGCAAACCTCGATTAACGAATCTGGTAACACCCAAATCGAACTCCAGGCTAGGCAGCGGCTATTTTATAAAGACGGGGAACGGGTAAAGTCGGTGGAAGGGCTAGAGTTAGTGCGAACGCAGCTCATCCTAAAAATCGACAGTCCCGAGTTGAGCGGGCAAACCGAAGCTTCCCCAATATGGGCTGACATTGAGTTAATCGAGAGCGAGGATAACTCCGAGGAAATGCTATTGCAAATGGTCATTCTCGAATCGCTGTCGGTTCGCCGGGATACGGATGCCGATCCTCTCGGCGGCACTCCCAAGACCAGCCTGTCCGTCCAAGATGGAGACGAGATTGCTCCAGGCGCAGTGGTTGCTCGTACCGAAATTCGCTGCTCCGAAGCCGGAGAAGTTCGCGGAATCCGCGAAGGTGCAGAGGCAATTCGCCGCGTGTTGGTGGTGCGCGATGCTGACCGCACCACCATTCCCACCGAGGAAACGCCCCAAGTTCAAGTTGGAGATTTAGTAGTGGCTGGAACTTCCCTATCTTCGGGAGCAACTGCACCGGATTCTGGTCAGGTTGTAGAGGTGAATTCCGATTCAGTCACAATGCGCTTGGGTCGCCCCTACCGCATTTCTGCTGGTGCAGTGCTGCATATTGAAGATGGGGGCTTGGTACAGCGGGGGGACAACCTCGTGTTGCTGGTCTACGAGCGTGCTAAAACTGGGGACATTATCCAGGGTTTACCCCGGATTGAGGAACTTCTAGAAGCGCGTAAACCTAGGGAAGCTTGCGTGTTGGCTCGACGCGCAGGGACTGCACAGGTGATTTATGGCGACGATGAGACAGTTGACGTTAAGGTGATTGAAGCCGATGGAGTTGTCAGCGATTATCCTGTCGGTTCTGGTCAGAACGTGCTAGTCTCCGATGGTCAGGAAGTCGGCATTGGCGAACCGCTGACGGACGGTCCTGCCAATCCCCACGAAATTTTAGAGACTTTCTTCGAGACTTATCAAGAAGAGATGGGCGTTTACGAAGCAGCCGTGTTTGGGCTGCAAAAGGCACAGCAGTTTCTAGTCAATGAGGTGCAGTCGGTGTATCAATCCCAGGGAATTGATATTTCGGACAAGCACATTGAGATTATTGTTCGCCAGATGACCTCGAAGGTGCGAGTCGATGATGGCGGTGATACCACCATGCTACCGGGAGAATTGGTCGATTTGCGCCAAATTGAGCAGGTGAATGAAGCGATGGCGATTACAGGAGGCGCACCAGCCCGCTATACGCCCATCTTGCTAGGAATCACCAAAGCCTCGCTCAACACGGACAGCTTTATTAGTGCTGCCAGCTTCCAGGAGACGACTCGCGTTCTTACCGAAGCTGCCATTGAAGGCAAGTCCGACTGGCTGCGCGGTTTGAAAGAGAATGTGATTATCGGACGCTTGATTCCGGCTGGAACTGGCTTCAATACTCACGAAAATGGGGGCAGCATGCTGGAGTCGGAAGGCCACAGCCCAGGAGGTGCAGCTTATTCGGTGCCAACAGAGCGCTACTCCCACGAAAATGGTGATCGCGCTAGCGATCACTTTAGTGAGGATGTAGTGCTAGATGACCAAACTGCCCGTGCCTACAACCTCGAAGACCGCCCGGATTACTCTGCCCAACAGAGCGAAGACTTGCCGATCCTCGATGATGAGGAAGGAGAGGCTGATAGCGACTTCAATTTGGGTGAGGATGAAGCTAGCGAGGAGTAG
PROTEIN sequence
Length: 1335
MTDEKPMTKEQEATFFNQVVDKGQLKNLIAWAFTNFGSARCSAMADQLKDMGFHYATKAGVSISVEDLQVPPGKRQMLDQAEAEINATEDRYRTGKITEVERFQKVIDTWNSTSEALKDEVVRNFQATDPLNSVYMMSQSGARGNLSQVRQLVGMRGLMADPQGEIIDLPIKTNFREGLTVTEYIISSYGARKGLVDTALRTADSGYLTRRLVDVSQDVIVREFDCGTQRSISLTSMSDGETTLIPLSDRLFGRVLAQDVSDPNTGEIIAQRNQSVDDPLSKKIAAVVEEVKVRSPLTCEAARSVCQHCYGWSLAHNRPVDLGEAAGIIAAQSIGEPGTQLTMRTFHTGGVFTGEVARQVRAPSEGTVSLSQQLRTRMVRTRHGDEREQVEVAGELILSPSESGSPAQNFSVTPGSLLLVKDGETVSAGQLLAEVAMAKPQRSTERAVKDVSTDLAGEVLFDSLLPEEKTDRQGNMTRIAQRSGLMWVLSGEVYNLLPGAEPEVKNGEKVEPGSVLAETKLASTGGGVVRLRDQDESRREIEIITASVRLAQAGIHRDRSGTREQYILHTANNQRFALKAAPGTKVQNNQVIAELIDDRYHTQTGGTIKYAGVDIDKRGKAKQGYEVTQGGTLLWIPEECHEVNKDISLLLVDEGQYVEAGTEVVKDIFCQSSGVVEVVQKNDILREIIIKPGELHLSEEPPKSGVDQIVNPGEEVISGVEVSELRYAEYIDTSEGKAVFLRPVTEYRVPDQPDVPSQTSINESGNTQIELQARQRLFYKDGERVKSVEGLELVRTQLILKIDSPELSGQTEASPIWADIELIESEDNSEEMLLQMVILESLSVRRDTDADPLGGTPKTSLSVQDGDEIAPGAVVARTEIRCSEAGEVRGIREGAEAIRRVLVVRDADRTTIPTEETPQVQVGDLVVAGTSLSSGATAPDSGQVVEVNSDSVTMRLGRPYRISAGAVLHIEDGGLVQRGDNLVLLVYERAKTGDIIQGLPRIEELLEARKPREACVLARRAGTAQVIYGDDETVDVKVIEADGVVSDYPVGSGQNVLVSDGQEVGIGEPLTDGPANPHEILETFFETYQEEMGVYEAAVFGLQKAQQFLVNEVQSVYQSQGIDISDKHIEIIVRQMTSKVRVDDGGDTTMLPGELVDLRQIEQVNEAMAITGGAPARYTPILLGITKASLNTDSFISAASFQETTRVLTEAAIEGKSDWLRGLKENVIIGRLIPAGTGFNTHENGGSMLESEGHSPGGAAYSVPTERYSHENGDRASDHFSEDVVLDDQTARAYNLEDRPDYSAQQSEDLPILDDEEGEADSDFNLGEDEASEE*