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sw_6_scaffold_72_22

Organism: SW_6_Halosimplex_carlsbadense_69_23

near complete RP 34 / 55 MC: 10 BSCG 25 / 51 MC: 7 ASCG 35 / 38 MC: 4
Location: comp(17722..18078)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:ELZ25451.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ELZ25451.1};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 118.0
  • Bit_score: 203
  • Evalue 2.10e-49
DNA-directed RNA polymerase subunit F n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQD3_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 84.7
  • Coverage: 118.0
  • Bit_score: 203
  • Evalue 1.50e-49
RNA polymerase Rpb4 similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 118.0
  • Bit_score: 193
  • Evalue 4.50e-47

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 357
ATGACGATATTCAAGGAGAAAGTCGACGAGGAGTACCTGACGCTGGCGGAGACGAAGGTGATCCTCCAGGACCTCGAACGCGAGCGCGCGGCCGAGGAGGAGCGCGAGATGCGGTACGAACTCGCGCGGGCCATCGAGCACGTCAACCGCTTCGCGGTGCTGGACCCCGAAGAGGCTCGCGAGTTCGTCGAGGAACTGCTCGAACTGGAGAAAGTCGACGAGCCGACCGCCTACAAGATCGCCAACCTCCGGCCCGCGGACCGCGACGAACTCCGGGCGGTCTACGCCCAGGAGCGGTACTCGCTATCGGGCGACGAACTCGACGAGATTCTCGAGGTCGTCGCGAAGTACGCGTGA
PROTEIN sequence
Length: 119
MTIFKEKVDEEYLTLAETKVILQDLERERAAEEEREMRYELARAIEHVNRFAVLDPEEAREFVEELLELEKVDEPTAYKIANLRPADRDELRAVYAQERYSLSGDELDEILEVVAKYA*