ggKbase home page

qs_1_scaffold_1985_3

Organism: QS_1_Bacteroidetes_Order_II__Incertae_sedis_67_20

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 3232..4113

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000 similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 278.0
  • Bit_score: 315
  • Evalue 9.60e-83
Shikimate dehydrogenase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEA1_RHOMR similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 278.0
  • Bit_score: 315
  • Evalue 6.80e-83
shikimate dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 278.0
  • Bit_score: 315
  • Evalue 1.90e-83

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodothermus marinus → Rhodothermus → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 882
ATGACCAATCGCCCCTCCAAAATCGCCCATCCGGGATCGCTCGTCGCGCTGCTGGGCCGACCGGTGGCGCACTCCCTCTCGCCGCTGATGCACAACACCGCCTTCCGCGCGCAGGACGTAAGCCACGTCTATGTCGCCTTCGAGGTGGCTCCCCAGGCGCTCGGGGAGGCCGTCGCGGGCCTGCGCGCGCTGGGCTTGGCCGGGGCCAACGTCACCGTCCCGCACAAGGAAGCGGTGGTCGAACATCTCGATGCGTTGACCGAACGAGCCGAAGCCGTCGGCGCGGTGAACACGCTCTTCTGGAAGAAGAACGGCGCGCTTACCGGCGACAACACCGACGCGGCCGGGTTCCTCGCGCCGCTGGAGCCTCGCGCCGACCGCCTGCGCGGACGGAACGCCCTCATCTTCGGGGCGGGCGGGGCGGCGCGAGCCGCCACCTACGCGCTACTCACGTCGGGGTTTGCGCTCCGCCGCCTCACGCTGGCAGCGCGCACCCCCAGCAGGGCCGAGCGCCTGGCGGCGGATCTCGCGCCCTTCGACGAAAAAGGTGCGCTGGCGGTCGTGCCGGAGGGCGAGGCCGGCGAAGCCGTGCGCTCCGCGCACCTGCTGGTCAACGCCACGCCGCTGGGAATGGAGCCGGACCCCGAGGGCACGCCGTGGTCCGACGCGAGCGACTTTTCCGGCGGCCAGCTCGCCTACGACCTCGTCTACGCTCCGCGCGAGACGCGCTTCCTGCACGAGGCCGAGCGCCAGGGGGCCACGCCCATCGGCGGGCTGGAGATGCTCGTCGGGCAGGCGGCGGCCAGCTACCGGCGCTGGACCGGGCGCGACATGCCGACCGGGGCGGTGCGCCAAGCGTTGCGCGAGCACCGGCGCGCGTGA
PROTEIN sequence
Length: 294
MTNRPSKIAHPGSLVALLGRPVAHSLSPLMHNTAFRAQDVSHVYVAFEVAPQALGEAVAGLRALGLAGANVTVPHKEAVVEHLDALTERAEAVGAVNTLFWKKNGALTGDNTDAAGFLAPLEPRADRLRGRNALIFGAGGAARAATYALLTSGFALRRLTLAARTPSRAERLAADLAPFDEKGALAVVPEGEAGEAVRSAHLLVNATPLGMEPDPEGTPWSDASDFSGGQLAYDLVYAPRETRFLHEAERQGATPIGGLEMLVGQAAASYRRWTGRDMPTGAVRQALREHRRA*