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qs_5_scaffold_235_18

Organism: QS_5_Halobacteriales_64_25

near complete RP 33 / 55 MC: 4 BSCG 30 / 51 MC: 1 ASCG 37 / 38 MC: 1
Location: 16993..17859

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAB5_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 283.0
  • Bit_score: 403
  • Evalue 1.40e-109
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 283.0
  • Bit_score: 403
  • Evalue 2.00e-109
transcription initiation factor iib (tfiib) similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 295.0
  • Bit_score: 379
  • Evalue 1.10e-102

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 867
ATGAGTCAGGTGCAGTCGAAGGCCGCCTGTCCGGAGTGTAGCGGGCGACTCGAAGCGGGCGAGGAGACCTTCTGTTCCGACTGCGGGCTGGTCGTCGCCGAGGACTACCTCGATCGCGGCCCGGAGTGGCGATCGTTCAGCGACGATTCCGAGAACCGCGAGCGGACCGGCGCGCCGCTTACCCGGGCGCGTCACGATCGCGGCCTCTCGACGGAGATCGGCCGCTCACGGGATCTCAGCTCGAAGAAGCGCCGCCAGCTCGCCCGGATGCGTCGCCAGCACAACCGCGCACGTATCTCCTCGAAGGCCGATCGCAATCGAGTGTATGCCTTCACCGAGATCCGCCGGCTGGTGAGCAGTCTCGGACTCCCCCAGTCCATCCGCGATCAGGCCTGCGTGCTCTTCGAGTCGGCCCAGTCCGCCGATCTCCTGCGCGGGCGCTCGCTGGAGGGGTTCGCCGCCGCGTCGGTCTATGCCGTCTGTCGAACCGCCGCCGTCTCCCGAACGGTGGGTGAGATCGCCGACGTCGCACGTGCCTCCGAGGCCGAACTCAAGGCCGCCTACGACGCGCTCAATCGCGAACTCGGTCTCCCTACTGGGCCGATCGACCCGGCCGAATACATCGGGCGCTTCGCGAGCCAACTCGACGTCCCGAAGGCCGTCGAGGCACGCGCACGCGAGTTCGTGACCGAAGGGCGCGAGCGCGGACTGATCAACGGGCGCAACCCGAGCGGCTTTGCCACCACCTGTCTGTACGCCGCGGCGATCGAGGCCGATCACGACCTCACCCAGCGCGAAGCCGCCGACGTCGCGGGTGTCACTCCCGTTACGCTTCGGACGGCGTACTACGACCTGATCGAGGAGTGA
PROTEIN sequence
Length: 289
MSQVQSKAACPECSGRLEAGEETFCSDCGLVVAEDYLDRGPEWRSFSDDSENRERTGAPLTRARHDRGLSTEIGRSRDLSSKKRRQLARMRRQHNRARISSKADRNRVYAFTEIRRLVSSLGLPQSIRDQACVLFESAQSADLLRGRSLEGFAAASVYAVCRTAAVSRTVGEIADVARASEAELKAAYDALNRELGLPTGPIDPAEYIGRFASQLDVPKAVEARAREFVTEGRERGLINGRNPSGFATTCLYAAAIEADHDLTQREAADVAGVTPVTLRTAYYDLIEE*