ggKbase home page

qs_5_scaffold_454_17

Organism: QS_5_Halobacteriales_64_25

near complete RP 33 / 55 MC: 4 BSCG 30 / 51 MC: 1 ASCG 37 / 38 MC: 1
Location: 16543..17520

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1P5_HALMD similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 324.0
  • Bit_score: 539
  • Evalue 2.50e-150
transcription factor TFIIB cyclin-related protein similarity KEGG
DB: KEGG
  • Identity: 84.0
  • Coverage: 324.0
  • Bit_score: 539
  • Evalue 7.00e-151
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 324.0
  • Bit_score: 539
  • Evalue 3.50e-150

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halomicrobium mukohataei → Halomicrobium → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 978
ATGAAAGACACGGACACACGGATGCGAACGCGGGTCGCCGAAGACGAACATGAGACCGAGACGGAAGACGAACGCGACGTCCTCGACTGTCCCGAGTGCAGCGGGAAGGTCGTCGCTGACAGCGGCCACGGCGAGACCGTCTGTACCGACTGCGGGCTCGTCATCGCAGAGAACGAGATCGACCGGGGACCGGAGTGGCGCGCCTTCGACTCCCAAGAGAAGAGTCAAAAGTCCCGTGTCGGTGCGCCCACGACAAAGATGATGCACGACAAGGGCCTGTCGACCAATATCGACTGGCGCGACAAGGACGCCTACGGTCGATCACTCGGGTCGCGCCAGCGCGCGAAGATGCAACGCCTTCGCAAGTGGAACGAGCGATTCAGAACCCGGGACTCCAAAGACCGCAATCTCAAGCAAGCCCTCGGTGAGATCGACCGGATGGCGAGCGCCTTGGGGCTGCCCGAGACAGTCAGGGAGACCGCGAGCGTGATCTATCGACGCGCGCTCGACGAGAACCTCCTCCCAGGGAGATCGATCGAAGGCGTTTCGACGTCGGCGGTGTACGCCGCTGCCCGACAGGCCGGCGTTCCCCGTAGTCTCGACGAGATCACTGACGTCTCCCGCGTCGAGAAAAGCGAGATCGCCCGTACGTATCGGTACGTCGTGCGCGAACTCGGACTCGAGATCCAGCCTGCAGACCCCGAGAGCTACGTCCCCCGCTTCGCCTCGGCGCTCGAAATCTCCGACGAGGCTGAGGGCCGGGCACGGAAACTGCTTCGCAACGCGAAGGAACAGGGCGTCCACAGCGGGAAGAGTCCCGTTGGACTAGCCGCCGCCGCTGTTTACGCCGCCGCGTTGCTCACCAACGAGAAAACCACTCAGGCCGCTGTCAGCGAGGTCGCCGATATCTCAGAGGTCACGATCCGCAACCGGTATCACGAACTTCTCGAAGCCGAACAGGACCTGCAGCTCGCTTAG
PROTEIN sequence
Length: 326
MKDTDTRMRTRVAEDEHETETEDERDVLDCPECSGKVVADSGHGETVCTDCGLVIAENEIDRGPEWRAFDSQEKSQKSRVGAPTTKMMHDKGLSTNIDWRDKDAYGRSLGSRQRAKMQRLRKWNERFRTRDSKDRNLKQALGEIDRMASALGLPETVRETASVIYRRALDENLLPGRSIEGVSTSAVYAAARQAGVPRSLDEITDVSRVEKSEIARTYRYVVRELGLEIQPADPESYVPRFASALEISDEAEGRARKLLRNAKEQGVHSGKSPVGLAAAAVYAAALLTNEKTTQAAVSEVADISEVTIRNRYHELLEAEQDLQLA*