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sw_10_scaffold_11

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_11_1
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(47..1333)
-----------------
DNA (1287bp)
protein (429aa)
Alcohol dehydrogenase, class IV n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M1D1_9EURY
Alcohol dehydrogenase, class IV {ECO:0000313|EMBL:EMA38409.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hameline
alcohol dehydrogenase, class IV
sw_10_scaffold_11_2
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1536..1784)
-----------------
DNA (249bp)
protein (83aa)
hypothetical protein id=24619044 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
Uncharacterized protein {ECO:0000313|EMBL:ERH06456.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
hypothetical protein
sw_10_scaffold_11_3
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2024..3481)
-----------------
DNA (1458bp)
protein (486aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_0
Probable 3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MWT7_HALMO
3-phosphoshikimate 1-carboxyvinyltransferase
sw_10_scaffold_11_4
unknown

Not on your lists

comp(3542..3781)
-----------------
DNA (240bp)
protein (80aa)

This feature has no annotations

sw_10_scaffold_11_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3835..4281
-----------------
DNA (447bp)
protein (149aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CDX6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20853.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_10_scaffold_11_6
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4338..4703
-----------------
DNA (366bp)
protein (122aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SLL6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ16616.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
sw_10_scaffold_11_7
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4846..5748
-----------------
DNA (903bp)
protein (301aa)
ATP-dependent helicase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NE42_9EURY
ATP-dependent helicase {ECO:0000313|EMBL:EMA56252.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM
helicase with metal-binding cysteine cluster
sw_10_scaffold_11_8
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5889..7436
-----------------
DNA (1548bp)
protein (516aa)
ATP-dependent helicase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NE42_9EURY
ATP-dependent helicase {ECO:0000313|EMBL:EMA56252.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM
DEAD/DEAH box helicase domain protein
sw_10_scaffold_11_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7501..8631)
-----------------
DNA (1131bp)
protein (377aa)
degP; probable periplasmic serine protease (EC:3.4.21.-)
Periplasmic serine proteinase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDC4_9EURY
Periplasmic serine proteinase {ECO:0000313|EMBL:EMA55079.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
sw_10_scaffold_11_10
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8876..10126
-----------------
DNA (1251bp)
protein (417aa)
Peptidase M24 n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J2P0_HALJB
X-Pro aminopeptidase
Peptidase M24 {ECO:0000313|EMBL:ELY34987.1}; X-Pro aminopeptidase {ECO:0000313|EMBL:ADJ14997.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkal
sw_10_scaffold_11_11
unknown

Not on your lists

comp(10199..10606)
-----------------
DNA (408bp)
protein (136aa)

This feature has no annotations

sw_10_scaffold_11_12
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(10825..11577)
-----------------
DNA (753bp)
protein (251aa)
Putative phosphatidyltransferase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I0K8_CALAS
putative phosphatidyltransferase
Putative phosphatidyltransferase {ECO:0000313|EMBL:BAL98795.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (str
sw_10_scaffold_11_13
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11878..12894
-----------------
DNA (1017bp)
protein (339aa)
Prephenate dehydrogenase n=2 Tax=Halococcus hamelinensis RepID=M0LXT3_9EURY
Prephenate dehydrogenase {ECO:0000313|EMBL:EMA37973.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 10
prephenate dehydrogenase
sw_10_scaffold_11_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13031..14440
-----------------
DNA (1410bp)
protein (470aa)
probable S-adenosylmethionine-dependent methyltransferase (EC:2.1.1.-)
Methyltransferase type 12 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N627_9EURY
Methyltransferase type 12 {ECO:0000313|EMBL:EMA53387.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DS
sw_10_scaffold_11_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14487..15092)
-----------------
DNA (606bp)
protein (202aa)
Major facilitator superfamily MFS_1 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QMX4_9EURY
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EFW93769.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus p
macrolide-efflux protein / Permease
sw_10_scaffold_11_16
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15095..15805)
-----------------
DNA (711bp)
protein (237aa)
Major facilitator superfamily MFS_1 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QMX4_9EURY
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EFW93769.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus p
protein of unknown function (DUF894)
sw_10_scaffold_11_17
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16260..17129
-----------------
DNA (870bp)
protein (290aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=1132509 spe
surE1; 5'-nucleotidase SurE (EC:3.1.3.5)
5'-nucleotidase SurE n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M0S8_9EURY
sw_10_scaffold_11_18
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17213..17767)
-----------------
DNA (555bp)
protein (185aa)
Monovalent cation/proton antiporter, MnhG/PhaG subunit n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QS17_9EURY
Monovalent cation/proton antiporter, MnhG/PhaG subunit {ECO:0000313|EMBL:EFW92786.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" sou
Na(+):H(+) antiporter, subunit G
sw_10_scaffold_11_19
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17764..18060)
-----------------
DNA (297bp)
protein (99aa)
Multisubunit na+/h+ antiporter, mnhf subunit n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N503_9EURY
Multisubunit na+/h+ antiporter, mnhf subunit {ECO:0000313|EMBL:EMA51780.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloco
multiple resistance and pH regulation protein F
sw_10_scaffold_11_20
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18050..18604)
-----------------
DNA (555bp)
protein (185aa)
Multiple resistance/pH regulation related protein E n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M4F7_9EURY
Multiple resistance/pH regulation related protein E {ECO:0000313|EMBL:EMA39265.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
multisubunit na+/h+ antiporter, mnhe subunit
sw_10_scaffold_11_21
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18633..20408)
-----------------
DNA (1776bp)
protein (592aa)
Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter subunit MnhD n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NQD9_HALBP
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter subunit MnhD
Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter subunit MnhD {ECO:0000313|EMBL:ELY23506.1}; Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit {ECO:0000313|EMB
sw_10_scaffold_11_22
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20401..20898)
-----------------
DNA (498bp)
protein (166aa)
NADH-ubiquinone oxidoreductase chain 4L n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M0C4_9EURY
NADH-ubiquinone oxidoreductase chain 4L {ECO:0000313|EMBL:EMA39267.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
multisubunit sodium/proton antiporter subunit MrpC
sw_10_scaffold_11_23
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20895..21731)
-----------------
DNA (837bp)
protein (279aa)
Multisubunit na+/h+ antiporter, mnhb subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXS5_9EURY
Multisubunit na+/h+ antiporter, mnhb subunit {ECO:0000313|EMBL:EMA50113.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloco
Na(+):H(+) antiporter, subunit B
sw_10_scaffold_11_24
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21728..24220)
-----------------
DNA (2493bp)
protein (831aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH:ubiquinone oxidoreductase subunit 5 (Chain l)/multisubunit na+/h+ antiporter, mnha subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWL1_9EURY
NADH:ubiquinone oxidoreductase subunit 5 (Chain l)/multisubunit na+/h+ antiporter, mnha subunit {ECO:0000313|EMBL:EMA50112.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteria
sw_10_scaffold_11_25
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24480..25826
-----------------
DNA (1347bp)
protein (449aa)
Sulfatase arylsulfatase A-like protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZ23_9EURY
Sulfatase arylsulfatase A-like protein {ECO:0000313|EMBL:EMA38696.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus h
sulfatase arylsulfatase A-like protein
sw_10_scaffold_11_26
unknown

Not on your lists

26019..26168
-----------------
DNA (150bp)
protein (50aa)

This feature has no annotations

sw_10_scaffold_11_27
Marinobacter salarius, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26204..27052
-----------------
DNA (849bp)
protein (283aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1420917 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae;
DNA methylase N-4/N-6 domain protein n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0L750_MAGSM
hypothetical protein
sw_10_scaffold_11_28

Not on your lists

comp(27049..27972)
-----------------
DNA (924bp)
protein (308aa)
Uncharacterized protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1BVA1_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD76906.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
sw_10_scaffold_11_29
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28168..28461
-----------------
DNA (294bp)
protein (98aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEA2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44056.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
sw_10_scaffold_11_30
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28597..28929
-----------------
DNA (333bp)
protein (111aa)
Cold shock protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZA6_9EURY
Cold shock protein {ECO:0000313|EMBL:EMA37694.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
csp; cold shock protein
Displaying items 1-30 of 96 in total

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