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sw_12_scaffold_3574_4

Organism: SW_12_Halococcus_67_38

partial RP 24 / 55 MC: 2 BSCG 20 / 51 MC: 1 ASCG 27 / 38 MC: 3
Location: comp(1604..1993)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3Q4_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 96.6
  • Coverage: 87.0
  • Bit_score: 171
  • Evalue 4.10e-40
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 87.0
  • Bit_score: 171
  • Evalue 5.80e-40
rpl13p; 50S ribosomal protein L13P similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 87.0
  • Bit_score: 140
  • Evalue 3.70e-31

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 390
ATGAACGCCGCGGAGTTCGACCCCGATCTCGTGGTCGACGCCCGGGACTGCATTCTCGGGCGGGTCGCGAGCCAGGTCGCCGAACGCGCCATGGACGGCGAGCGCGTCGCCGTGGTCAACGCCGAAGAGGCGGTCATCACGGGCGGCACCGACGACGTGATGGGCGTCTTCGAGGACCGTGCCGACCTCGGTTCGGACAGCGGGCCGTACTATCCCAAACGTCCGGATCGGATCATGAAGCGCTCGATCCGCGGGATGATCCCNNNNNNNNNNNNNNNNNNNNNNNNNGGTCTACGTCGGCGATCCCTTCGAGGACGGCGACGTTCTGGAGGGCACATCGTTGAATCGGCTGTCGAACACCAAGTTCGTCCAACTGGGCGACGTGAGTGA
PROTEIN sequence
Length: 130
MNAAEFDPDLVVDARDCILGRVASQVAERAMDGERVAVVNAEEAVITGGTDDVMGVFEDRADLGSDSGPYYPKRPDRIMKRSIRGMIXXXXXXXXXGLRRRSLRGRRRSGGHIVESAVEHQVRPTGRRE*