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sw_4_scaffold_1256_1

Organism: SW_4_Halococcus_67_50

near complete RP 24 / 55 MC: 3 BSCG 20 / 51 MC: 2 ASCG 31 / 38 MC: 3
Location: comp(1..210)

Top 3 Functional Annotations

Value Algorithm Source
NMD3 family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBG7_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 90.0
  • Coverage: 70.0
  • Bit_score: 141
  • Evalue 3.20e-31
NMD3 family protein {ECO:0000313|EMBL:EMA55317.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989 similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 70.0
  • Bit_score: 141
  • Evalue 4.50e-31
NMD protein affecting ribosome stability and mRNA decay similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 75.0
  • Bit_score: 100
  • Evalue 1.80e-19

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 210
ATGAGCGAGTCGCGGCAGTTCTGCCCGCGGTGTGGCGGTCCCGTCGAATCGGGGGCGACGGTCGCCGCGACCGATGGACGCGCCCCCATCTGCGAGGACTGCTATTTCGAGAACTTCGACCTCGTCGACGCGCCCGACCGGATCGAGGTCCTCGTGTGTGCGACCTGCGGGGCGGTCCAGCGCGGCGAGCGCTGGGTCGATGTCGACGCG
PROTEIN sequence
Length: 70
MSESRQFCPRCGGPVESGATVAATDGRAPICEDCYFENFDLVDAPDRIEVLVCATCGAVQRGERWVDVDA