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sw_4_scaffold_5350_3

Organism: SW_4_Halobacteriales_67_16

partial RP 22 / 55 MC: 2 BSCG 17 / 51 ASCG 20 / 38
Location: comp(1866..2912)

Top 3 Functional Annotations

Value Algorithm Source
tRNA splicing endonuclease (EC:4.6.1.16) similarity KEGG
DB: KEGG
  • Identity: 62.8
  • Coverage: 320.0
  • Bit_score: 387
  • Evalue 4.70e-105
tRNA-splicing endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; EC=4.6.1.16 {ECO:0000256|HAMAP-Rule:MF_01834};; tRNA-intron endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; TaxID=1592728 species="Archaea similarity UNIPROT
DB: UniProtKB
  • Identity: 62.8
  • Coverage: 320.0
  • Bit_score: 387
  • Evalue 2.40e-104
tRNA-splicing endonuclease n=2 Tax=Haloarcula hispanica RepID=G0HRM4_HALHT similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 320.0
  • Bit_score: 387
  • Evalue 1.70e-104

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Taxonomy

Haloarcula sp. CBA1115 → Haloarcula → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1047
ATGCAGGCACGCGTCGACGGGGACCGCGTCAGGCTCGACGAGCGCGGTCGCGAGCGATTCTACGACTCTCGGGGCTACGGCCACCCCGTCGACGGCGAGTTACATCTCTCGCCGGTCGAGACGGCCCACCTCCTCTATCGGGGTGACCTCGACGGCGTCGACGGGATGGGGTTCCGGGCGTTTCTCGAACGCGAGAACGACCTCGCCTCTCGCTTCCTCGTCTACAAGGACCTCCGTGACCGCGGCTTCTATCTCACGCCGGCGCGCGACGGCTGGGTCGACGACCGTGCTGGAGCAGACGCGCCGCCGTCCGACGATGTCGACTTCGTCGTCTACCCGCGCGGCAAGGGACCGTGGGACGACGCCGTCGCGTATCGCGTGCGCGTCGTCGCCGAGCGAGAGTCCGTCCCCGTCGACGCGCTGGGGGATGTCGTCCTCGCGGTCGTCGACGAGGAGTCGGAACTGACGTATCTGGAGACGACCCGCCCGGACGTGTCGGGCACCGCGCCGGATCCGACAGACACCACCGCCGAGGCCGTCCTGTTGAACGACCGACTGCTGGCGTGGAACCCGCCCGAACGCCTCCACACGGCGGGGTTCTACGGCCGGTGGCTCGGCGACGACCGCGAAGTCCTCCAGCTGTCGCTCCTCGAAGGTGCCTATCTCGCCGATCGGGGCGTCCTCTCCGTTCCCGGTGGTCGCGACGCCATCCTCGAACGCGGTCGTGGGGCGGAGGGCGACCGGTTCGACCGCCGACTCGCGGTGTACGCCGCTCTCCGCGAGCGCGGCGTCGTCCCCAAGACCGGGTTCAAGTTCGGGGCCGACTTCCGGACGTACGCGGAGGTCTCCTCGGTCGACGACTTGGGCCACTCCGAGCGGTTGGTGCGCGTGCTGTCGCCCGGGCACGTCTTCCGCCCGCGCGACCTCTCGCTCGACGTGCGACTGCTGACCTGCTTACGGCTCCGAGGCTCCCTCGATAAACAGCGCGATGTCGTCGGCCGCGATTCCGGCGTCCTGCCACGCCGGCACCGAATCGAGCCAGCGTAG
PROTEIN sequence
Length: 349
MQARVDGDRVRLDERGRERFYDSRGYGHPVDGELHLSPVETAHLLYRGDLDGVDGMGFRAFLERENDLASRFLVYKDLRDRGFYLTPARDGWVDDRAGADAPPSDDVDFVVYPRGKGPWDDAVAYRVRVVAERESVPVDALGDVVLAVVDEESELTYLETTRPDVSGTAPDPTDTTAEAVLLNDRLLAWNPPERLHTAGFYGRWLGDDREVLQLSLLEGAYLADRGVLSVPGGRDAILERGRGAEGDRFDRRLAVYAALRERGVVPKTGFKFGADFRTYAEVSSVDDLGHSERLVRVLSPGHVFRPRDLSLDVRLLTCLRLRGSLDKQRDVVGRDSGVLPRRHRIEPA*