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sw_9_scaffold_1219_7

Organism: SW_9_Halococcus_67_24

near complete RP 28 / 55 MC: 5 BSCG 25 / 51 MC: 3 ASCG 38 / 38 MC: 3
Location: 3689..4561

Top 3 Functional Annotations

Value Algorithm Source
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 292.0
  • Bit_score: 530
  • Evalue 1.90e-147
Probable tRNA pseudouridine synthase B n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBB5_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 292.0
  • Bit_score: 530
  • Evalue 1.30e-147
H/ACA RNA-protein complex component Cbf5p similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 290.0
  • Bit_score: 432
  • Evalue 1.10e-118
  • rbh

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 873
ATGCGCAGTCCACCGGACGAGCGCTCCCCCGACGACCGCCCCGCGTTCGGCGTCGTGAACCTCGACAAACCGCCCGGCCCTTCCGCCCACCAGGTCACGGGCTGGGTCCGCGATCTCGTCGGGGTCGACCGCGCGGCCCACGCCGGCACGCTCGATCCGAAAGTGACGGGCTGTCTGCCGATCCTGCTCGGCGACGCGACCCGGCTCGCCCAGGTCTTCCTCGAAGGCGCGAAGGAGTACGTGGCGGTCCTCGAACTCCACGGCCCCGCGCCCGACGATCTCGACGCCGTGCTCGCGGCGTTCGAGGGGGCGATCCATCAGAAACCACCGAAAAAGAGCGCGGTCGCGCGGCGGCTGCGGGTCCGGACGATCCACGCGCTCGACGTGCTCGACGTCGAGGAGCGTCGCGTGCTCTGCCGGATCCGGTGTGAGAGCGGAACCTACGTCAGGAAGCTGTGTCACGACCTCGGTCTCGCGCTCGGGACGGGCGCGCATATGGGCGACCTCCGGCGAGTAGGAACGGAGCCGTTCGACGACACCGATCTCGTGAGCCTCCACGACCTCACGGACGCGCTCGCGTTCGCCGAGGACGGCGACACCGCTCCGCTCGCCGACGCCGTGCAACCGGCCGAGCGCGCGCTCGTGCATCTCCCGCGGGTGACGATCGCGCCGAGCGCTGCCCGCGAGGTGGCGGAGGGTGCGCCGGTGTACGCACCAGGCGTGCTCTCGATCGAGGGCACGTCGGCGGCGAACGACGAACCGCTGGTGGCGTGTTACACGCCCGACGGGGCCGCGGTCTGTCTCGGCCGGCTCGTGGGCGAGGTCGACGCCGAACGCGGAACGGTCGTCGACCTCGAACGCGTCCTGATCTAA
PROTEIN sequence
Length: 291
MRSPPDERSPDDRPAFGVVNLDKPPGPSAHQVTGWVRDLVGVDRAAHAGTLDPKVTGCLPILLGDATRLAQVFLEGAKEYVAVLELHGPAPDDLDAVLAAFEGAIHQKPPKKSAVARRLRVRTIHALDVLDVEERRVLCRIRCESGTYVRKLCHDLGLALGTGAHMGDLRRVGTEPFDDTDLVSLHDLTDALAFAEDGDTAPLADAVQPAERALVHLPRVTIAPSAAREVAEGAPVYAPGVLSIEGTSAANDEPLVACYTPDGAAVCLGRLVGEVDAERGTVVDLERVLI*