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RifSed_csp2_19ft_3_scaffold_25446_2

Organism: RifSed_csp2_19ft_3_metabat_bin_308

near complete RP 38 / 55 MC: 2 BSCG 42 / 51 MC: 2 ASCG 9 / 38 MC: 3
Location: 486..824

Top 3 Functional Annotations

Value Algorithm Source
Glycine-rich RNA-binding protein GRP1A id=3012495 bin=GWC1_OD1_38_17 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 84.0
  • Bit_score: 117
  • Evalue 8.00e-24
Glycine-rich RNA-binding protein GRP1A {ECO:0000313|EMBL:KKQ59011.1}; TaxID=1618896 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 84.0
  • Bit_score: 117
  • Evalue 1.10e-23
RNP-1 like RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 84.0
  • Bit_score: 101
  • Evalue 9.80e-20

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Taxonomy

GWC1_OD1_38_17 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 339
TTGTTTTTAGAAGTTTTTCGGCCCCTTTCATGGCTTCAAGAACAAACTTCCACTTTACACATCAAGGAGGTGATAACAAAAATGGCAACAAAACTATATGTAGGAAATATTCCTTATGGCATAACGAATGAACAGTTGTCTGAGATCTTTTCTCAGGCAGGATCTGTCGTAAGCGCAACCATTATTACCGATCGAACGTCTGGTCGTTCAAAGGGTTTTGGTTTTGTGGAAATGGAAACTCCTGAAGCAGCCGAACAGGCTATCAAACTGTTTCATGGAAAACCATACGAAGGAAGAAACCTTGTCGTAAACGAAGCTCGTCCGCGTCAAGAGAGTTAA
PROTEIN sequence
Length: 113
LFLEVFRPLSWLQEQTSTLHIKEVITKMATKLYVGNIPYGITNEQLSEIFSQAGSVVSATIITDRTSGRSKGFGFVEMETPEAAEQAIKLFHGKPYEGRNLVVNEARPRQES*