ggKbase home page

RifSed_csp2_19ft_3_scaffold_8929_4

Organism: RifSed_csp2_19ft_3_Abawaca2_18

near complete RP 39 / 55 MC: 2 BSCG 44 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 1424..2731

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions 25..47 id=74997 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 similarity UNIREF
DB: UNIREF100
  • Identity: 70.5
  • Coverage: 434.0
  • Bit_score: 602
  • Evalue 1.90e-169
  • rbh
Tax=RBG_16_RIF_OP11_02_41_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 436.0
  • Bit_score: 645
  • Evalue 4.60e-182

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_OP11_02_41_13_curated → RIF-OP11-2 → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 1308
GTGAACTACAAAAAAGCTTTAGTTTCTGCAGTAGCAAGCGTAGCCATTTTATTAAATACTGCGATGCCTATTTTTGCAGGAACTACTTTAATTATAACTGGTAATGGTGATGGTTCGGAAAATGAGGCGAAAGTAGATCTGGATCAAACAACCACAGTTACTCAAACAAACGAGACCTCCATAACGAACGATATTGACGCCAACGCCAATTCAGGAGGAAATTCGGCAAGTAGAAACACCGGTGGAGCCGTTAATGTGGACACTGGTAACGCTAAAACCGATGTAAAAGTTTCTAATATTGCTAATAGCAATGAAGCAGTTGTTGATTGTTGCTTGGCAAATTCGGATGTGGATGTTTTGATCGAAGGTAACGGTAGTGACTCCGAAAATGAAGCCGAGTTAGAGATCGAGAGTGCAATAGAGCTTTACCAAACAAATGAAGCCAAGATCAAAAACGACGTTGATGCAAATGCCAATTCCGGCGATAACAGAGCTGACAGGAATACTGGGGGCGATGTTTCAGTCGAAACAGGTAATGCATCTGTAGATGTTGATCTTAAAACTGCTGCCAATAGTAATTCTGCTTTAATAAGCAGTCATGGTGGTACAGGCTCAGTTAGTCTCAAGATCCTCGGCAATGGAGACAGCAGCGATAACGACATAGATCTCGATTTGGATCACTCAGTTTTATTGACTCAAGCGAATTTCGCTAGTGTCAAAAACGACGTTGATGCAAATGCCAATTCCGGCGATAACAGAGCTAAAAGAAACACAGGTGGAGATGTAACAATTGATACAGGTGATGCTCACGCTGGAGTAGAAGTTGACAATATGGTTAACTTCAACTGGGCAGATGTCGACTGCGGATGTCTTTTTGACGTCTTTGCAAAGATCGCTGAGAACGGGTCCGATACCGAAAATGAGATTGAAGCCGAGTTTGAAAACGAAACCGTAGTTTTTCAAGACAATTCCTGCAAGAAACCCTGGTTCCCAGGCGTGCGACTTTTTGACAATCTGGGTGGCCGTGGTAGACATTATGATAAGGATTGTTTAACCAATTATCTTGATGCCTATGCAGGTACAGGCGACAACCGTGCAGACAGAAATACTGGGGATCCTGAAGGCGATCCAAGTGTTTTGACCGGTAACGCAGAGACTTTGGTTGATGTCGAAAATTCCGGCGGAAGCAATGTTTACGGGTCGGGAGCCCCTGAAGGATGGGGGTGGCCAGACTGGTCAGTGGGTGGTTTTAATCTAAACATAAGTTTGGATTTGAGTGCGCTACTTGAAGCATTGGGTTTGGCTTAA
PROTEIN sequence
Length: 436
VNYKKALVSAVASVAILLNTAMPIFAGTTLIITGNGDGSENEAKVDLDQTTTVTQTNETSITNDIDANANSGGNSASRNTGGAVNVDTGNAKTDVKVSNIANSNEAVVDCCLANSDVDVLIEGNGSDSENEAELEIESAIELYQTNEAKIKNDVDANANSGDNRADRNTGGDVSVETGNASVDVDLKTAANSNSALISSHGGTGSVSLKILGNGDSSDNDIDLDLDHSVLLTQANFASVKNDVDANANSGDNRAKRNTGGDVTIDTGDAHAGVEVDNMVNFNWADVDCGCLFDVFAKIAENGSDTENEIEAEFENETVVFQDNSCKKPWFPGVRLFDNLGGRGRHYDKDCLTNYLDAYAGTGDNRADRNTGDPEGDPSVLTGNAETLVDVENSGGSNVYGSGAPEGWGWPDWSVGGFNLNISLDLSALLEALGLA*