ggKbase home page

RifSed_csp2_19ft_3_scaffold_223913_3

Organism: RifSed_csp2_19ft_3_Abawaca2_18

near complete RP 39 / 55 MC: 2 BSCG 44 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 1115..2092

Top 3 Functional Annotations

Value Algorithm Source
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM id=74872 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 338.0
  • Bit_score: 609
  • Evalue 1.50e-171
  • rbh
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 33.9
  • Coverage: 345.0
  • Bit_score: 188
  • Evalue 3.00e-45
Tax=RBG_16_RIF_OP11_02_41_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 338.0
  • Bit_score: 609
  • Evalue 2.10e-171

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_OP11_02_41_13_curated → RIF-OP11-2 → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 978
ATGAGTGTGGGTATAGATATAGGGACTAAAACGATAAAAATTGTCGAGCTTGCCAAGTCTGCTGCTAAATTCAGATTAAAAGCGTCGGGGGCAATCGGCTATACTGGTCTTGAAGTTGAGGCACTTAAGAAACTCTTTAAGGAAGCCAAGATTTATGACAAAAAGGTTTCGATCTCGCTTCCTGAGTCCCAAGTCTTTACGAGAACCGTGAGCTTTCCCCAGCTAACCGACCAAGAGATATCTTCCGCTGTCAAATGGGAAGCCGAGCAATATATCCCAATTCCTTTAAGCGAAGCTGTGATGCAGCATCAGGTGCTTGAAAAACGGGACAATATGAATCCGCCGGACGTTTTAGTTCTTTTGGTTGCCGCGCAAAAAAACTTGGTGGAAAAGTATGTAAGGGTAGTGAGCTTGGCAGGCCTGAATTGCGTGGGAGTGGAAACAGAGCTTTTGGCAATGATTAGAAGTCTGGCGCCGATTGACCAAACTGTGATAATTGCCGATATCGGGGCTAAAGGAACTGATCTTGCAATTTCAAAAAACGGCATGCTTATTTTTTCAAGATCGATTCCAACCGCCGGCGACGCCTTTACTAGGGCTGTGGCCCAGTCGCTTGGTATAAATGCAGTTCAAGCAGAACAGTATAAAAGGACGTACGGTCTTTCCAAGGAGCAGTTAGAGGGAAAAGTAAAGGCGGCACTTGACCCTATTGTAAAAATTGTAGCCGAAGAAATTAAAAAGGCCATTCATTTTTATCAGTCCGAGGAGAAGGGTGAGTCGCCAACGTCTTTGATATTGACGGGGGGTGCAAGTGGCATGCCAGACATTGTGCCGACTTTAAGCAAATTTTTAGGAATGGAAGTGATTATCGGCAATCCTTTTTCTAAAATTGAAATGGATCTGAAAGTGGCTGCAAGTTTGCAAGGCTATTATCCTTTATATGCTGTTGCTGTTGGCCTGGCACTTCGTGGAGAATAA
PROTEIN sequence
Length: 326
MSVGIDIGTKTIKIVELAKSAAKFRLKASGAIGYTGLEVEALKKLFKEAKIYDKKVSISLPESQVFTRTVSFPQLTDQEISSAVKWEAEQYIPIPLSEAVMQHQVLEKRDNMNPPDVLVLLVAAQKNLVEKYVRVVSLAGLNCVGVETELLAMIRSLAPIDQTVIIADIGAKGTDLAISKNGMLIFSRSIPTAGDAFTRAVAQSLGINAVQAEQYKRTYGLSKEQLEGKVKAALDPIVKIVAEEIKKAIHFYQSEEKGESPTSLILTGGASGMPDIVPTLSKFLGMEVIIGNPFSKIEMDLKVAASLQGYYPLYAVAVGLALRGE*