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ACD40_16_3

Organism: ACD40

partial RP 43 / 55 MC: 9 BSCG 39 / 51 MC: 3 ASCG 0 / 38
Location: comp(1289..2050)

Top 3 Functional Annotations

Value Algorithm Source
23S RNA-specific pseudouridylate synthase similarity KEGG
DB: KEGG
  • Identity: 40.1
  • Coverage: 242.0
  • Bit_score: 164
  • Evalue 3.60e-38
Pseudouridine synthase n=1 Tax=Leptospirillum rubarum RepID=A3EQJ0_9BACT (db=UNIREF evalue=1.0e-37 bit_score=160.0 identity=39.58 coverage=86.2204724409449) similarity UNIREF
DB: UNIREF
  • Identity: 39.58
  • Coverage: 86.22
  • Bit_score: 160
  • Evalue 1.00e-37
PSI_RLU (db=PatternScan db_id=PS01129 from=67 to=81 evalue=0.0 interpro_id=IPR006224 interpro_description=Pseudouridine synthase, RluC/RluD, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 762
ATGGATATACCTATTTTGTACGAGGACGAGAGTATCGTCGTAATCGACAAACCGAGCGGGGTGGTGAGCAACAAAGCCGAGACAGTGAGAACTGAGACAGTTCAGGATTGGATCACTCCGAAGTTGAATTTCGATTTTCAAAGCAGAGAACAAGTGGAGTCGGAGGACGAAAAATATTTTCGGCAGAGAGAGGGGTTGGTACACCGATTGGACAAGGAGACTAGCGGAGTAATGGTACTGGCAAAGACAGTAGGTGCGTTTGTAGAGCTCTTAAGACAGTTTAAGGAGCGTGAGGTCAAGAAAACATATTTTGCCTTAACCCACGGGATTTGGCAGGTTAACTCGGGCGAAATTAGTCTGCCGATTGGGCGGAGGCGAGATGATCGGAAGAGAATGGGAGTGGTGGAGGACGGGCGGGAGAGTGTGACCGGATACCGGGCACTGGCGAGTTATCATCAGTGGCAATTCCCCAAGGAATTAAAAGTGGATACTCGCGGTTACACGGGGTTTAGTATGATTGAATTTGTTCCTCAGACTGGGAGGATGCACCAGATTAGAGTTCATGCTCGGCATATTGGACACCCGGTAGTCGGGGATGAGCAGTATGCGGGGAGAAAGCGGAGTCGAGAGGATCGGAAGTGGGCAAGTCATGTGATGCTTCAAGCACAAACTCTCGAGTTAACCCATCCTGTGACTAAGCAGAGAATGAAGTGGGAGAGCCAGGGCGAGGATCTAGCGAAAGTACTAGCATATTTAAGTTGA
PROTEIN sequence
Length: 254
MDIPILYEDESIVVIDKPSGVVSNKAETVRTETVQDWITPKLNFDFQSREQVESEDEKYFRQREGLVHRLDKETSGVMVLAKTVGAFVELLRQFKEREVKKTYFALTHGIWQVNSGEISLPIGRRRDDRKRMGVVEDGRESVTGYRALASYHQWQFPKELKVDTRGYTGFSMIEFVPQTGRMHQIRVHARHIGHPVVGDEQYAGRKRSREDRKWASHVMLQAQTLELTHPVTKQRMKWESQGEDLAKVLAYLS*