ggKbase home page

RifSed_csp1_16ft_2_scaffold_170618_4

Organism: RifSed_csp1_16ft_2_Methanoperedens_43_9

partial RP 23 / 55 MC: 5 BSCG 18 / 51 MC: 1 ASCG 20 / 38
Location: comp(2144..2386)

Top 3 Functional Annotations

Value Algorithm Source
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 53.0
  • Bit_score: 101
  • Evalue 4.50e-19
Lysyl-tRNA synthetase (class I) (EC:6.1.1.6) similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 50.0
  • Bit_score: 84
  • Evalue 1.20e-14
Lysine--tRNA ligase Tax=Methanosarcina barkeri RepID=SYK_METBA similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 50.0
  • Bit_score: 84
  • Evalue 4.10e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 243
ATGACCGACGAGACGATACACTGGGCAGATGTTATTGCAGAGAATGTACTTGCGAGGGGCAAAAAACATACCGTTGCTTCTGGAATTACACCCTCCGGAGCCATCCACATAGGGAACATGAGAGAAGTAGTAACAGCAGACGCTGTTTACAAAGCGCTCCCTGCGGGAACCATAAAAGCTATTCTGAGCATTTCCTGCTTCCCTTCATCGAAGCGTTGCACACACTCGGGATCAAACCCGTAG
PROTEIN sequence
Length: 81
MTDETIHWADVIAENVLARGKKHTVASGITPSGAIHIGNMREVVTADAVYKALPAGTIKAILSISCFPSSKRCTHSGSNP*