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RifSed_csp2_16ft_3_scaffold_922_24

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(22082..22867)

Top 3 Functional Annotations

Value Algorithm Source
rrp42p; exosome complex RNA-binding protein Rrp42 (EC:3.1.13.-) similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 256.0
  • Bit_score: 357
  • Evalue 2.30e-96
Exosome complex component Rrp42 Tax=Uncultured methanogenic archaeon RC-I RepID=RRP42_UNCMA similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 256.0
  • Bit_score: 357
  • Evalue 8.20e-96
Tax=RBG_16_Euryarchaeota_41_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 259.0
  • Bit_score: 445
  • Evalue 4.20e-122

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Taxonomy

RBG_16_Euryarchaeota_41_19_curated → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 786
ATGTCATTGAGTAATGAGATAATGGCAGAGCTGCATAAGGATTATATCTACAACCTCATGGTCAAAGGAGAAAGAGAGGACGGGAGGGCATTCGATCAGTGCAGGGAGATAACAATTGAAACAAACGTGATCAACAAAGCTGAAGGGTCTGCGCGCGTGAAGATCGGGGAAACCCACCTGGTCGTGGGAGTAAAGATCCAGCCAGGAACTCCATTTCCAGACACGCCTGATCAGGGCGTGATAATCACCAATCTTGAACTTATCCCTCTGGCATCGCCTGTATTTGAAGCAGGTCCTCCAAGGGAGGATGCGATCGAACTTGCAAGGGTGGTTGACAGGGGTATAAGGGAGTCAGGAGCTGTTGATCTATCCAAACTGTGCATCACTGAAGGCGAAAAGGTATGGATGGTATTCATAGACGTGCATGTGCTTGATGATGGAGGGAATATAATGGACGCTGCATCACTTGGTGCAACTGCAGCGCTTCTGACCTCGAAACTGCCTGCAAAACGCTATGATCTGGGCGAAGACTCCCCGGTTCCGATCAGGGACATACCTGTTGCCGTAACTGCAGTTGAAGTGGGAGGAACCATAATGCTCGATCCGTCGCTGAACGAAGAAAGCATAGCAGGGACCAAATTAACAGTAACATCCAATCAGAACGGGGATATTTCAGCAATGCAGAAGAGCGGTACACACCCGCTTACCAGTGAACAGATAAATTATATAGTGGATATTGCAATTGAGAAGGCAAAAGAATTGAGAGAAAAGTTCCTGGTGATATAA
PROTEIN sequence
Length: 262
MSLSNEIMAELHKDYIYNLMVKGEREDGRAFDQCREITIETNVINKAEGSARVKIGETHLVVGVKIQPGTPFPDTPDQGVIITNLELIPLASPVFEAGPPREDAIELARVVDRGIRESGAVDLSKLCITEGEKVWMVFIDVHVLDDGGNIMDAASLGATAALLTSKLPAKRYDLGEDSPVPIRDIPVAVTAVEVGGTIMLDPSLNEESIAGTKLTVTSNQNGDISAMQKSGTHPLTSEQINYIVDIAIEKAKELREKFLVI*