ggKbase home page

RifSed_csp2_16ft_3_scaffold_1325_44

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(35328..36302)

Top 3 Functional Annotations

Value Algorithm Source
tRNA N6-adenosine threonylcarbamoyltransferase Tax=Methanolobus psychrophilus R15 RepID=K4MAC4_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 75.5
  • Coverage: 326.0
  • Bit_score: 503
  • Evalue 1.50e-139
Metallohydrolase, glycoprotease/Kae1 family {ECO:0000313|EMBL:KCZ71999.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.1
  • Coverage: 323.0
  • Bit_score: 568
  • Evalue 5.30e-159
gcp; putative DNA-binding/iron metalloprotein/AP endonuclease similarity KEGG
DB: KEGG
  • Identity: 75.5
  • Coverage: 326.0
  • Bit_score: 503
  • Evalue 4.20e-140

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 975
ATGTCAGATATCACAGTACTTGGTCTTGAAGGAACAGCATGGAATTTGAGCGCAGCTATCGTGGATGAAAAAGATGTGATAGCAGAGACAACAGCCACATACATGCCGGCAAGCGGAGGTATTCATCCGCGTGAGGCTGCACAGCATCATGCAAATCATATTGCCCGGGTAATTAGAGAAACACTGAAAAAAGGCGGAAGAGATATAGATGCAGTGGCGTTCTCTCAGGGTCCCGGGCTTGGACCTTGCCTTCGAACCGTTGCAACAGCCGCACGGGCGCTTGCTTTATCGCTTGCAATCCCTCTTATAGGGGTCAATCACTGCATAGCCCATATCGAGGTCGGAAGATGGAAAACCAGTGCAAGCGATCCTGTAACCCTTTACGTCAGCGGTGCGAACTCACAGGTACTTGCATACAGGGCAGGTCGCTACAGGGTTTTTGGCGAGACGCTTGATATCGGAATAGGGAATGCCCTTGACAAGTTCGCAAGATCTGTGGGGCTGCCTCACCCTGGCGGTCCAAAGGTGGAAGAACTGGCAAAGCAGGCAGCGAGGTACATCCCCATTCCATACGTCGTGAAAGGCATGGATTTTTCATTCTCAGGTCTTACGACTGCTGCGCAGGAATCGGTCAAGAAGAACTCTCTGCCCGATGTCTGCCATTCGTTCCAGGAGACAGCGTTTGCAATGCTGGTTGAAGTGACTGAACGTGCTGTTGCGCATACAGGGAAGAACGAGGTTCTCCTTGCAGGTGGGGTTGGAGCAAATGCGCGCCTGAGAGAGATGCTCGGCTTCATGTGCCAAGACAGGGGTATAGAGTTCTATGTACCTGAGAAGCGCTTCATGGGAGATAACGGTGCCATGATAGCATATCTTGGTCTCCTTATGTACAGAGCTGGGTACAGTACCGCGATCTCGGATTCAGGGGTGAATCCGAATTACAGACCCGATGATGTGGAGGTTGTATGGCTGTAA
PROTEIN sequence
Length: 325
MSDITVLGLEGTAWNLSAAIVDEKDVIAETTATYMPASGGIHPREAAQHHANHIARVIRETLKKGGRDIDAVAFSQGPGLGPCLRTVATAARALALSLAIPLIGVNHCIAHIEVGRWKTSASDPVTLYVSGANSQVLAYRAGRYRVFGETLDIGIGNALDKFARSVGLPHPGGPKVEELAKQAARYIPIPYVVKGMDFSFSGLTTAAQESVKKNSLPDVCHSFQETAFAMLVEVTERAVAHTGKNEVLLAGGVGANARLREMLGFMCQDRGIEFYVPEKRFMGDNGAMIAYLGLLMYRAGYSTAISDSGVNPNYRPDDVEVVWL*