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RifSed_csp2_16ft_3_scaffold_1309_24

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 19348..20184

Top 3 Functional Annotations

Value Algorithm Source
Putative sigma activity regulator Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YUT3_NOCFA similarity UNIREF
DB: UNIREF100
  • Identity: 47.1
  • Coverage: 272.0
  • Bit_score: 248
  • Evalue 7.40e-63
anti-anti-sigma regulatory factor similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 275.0
  • Bit_score: 248
  • Evalue 2.10e-63
Tax=RBG_16_Euryarchaeota_41_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 278.0
  • Bit_score: 489
  • Evalue 2.10e-135

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Taxonomy

RBG_16_Euryarchaeota_41_19_curated → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 837
ATGACAGAACAGGAAGAACTCGTGGAAGAACTCAGCGGGCTGCTCGAGGACAATGCTGGCGACCTGAAGATGCAGTGGGTAAAGGAGATGACAGAGATGGGTCTGCTTGAGAAGCTGACTCCTATAGAGATAGAGCAGCAATCCTCGACCATCTATGATACCTGCGTTTTGACCCTGAAGACAGGGATGTACGAGGCAGCGAAAAAATATGCACGCGAGATGGCGAAAAAAGGTGTGCTTGAAGCCATGACCGTGGACCAGATAATAATGGGCATGCTGAAGCTTCGTGATGTTTACGGCAGGTTTGTTTTCTCCAAGTACCAGAGCGATGCTGAAAAACTGTACGAAGTGCTCGGGGTATATGAGCCGGTCGCGAACAGGATATTGAGCATCGTTGCCCTTGCTTTCGTGGAAGAGAGGGAAAGGGTGATCAAGGAGCAGCAGCAGGCCATGCTCGCCCTCTCCACGCCTGTACTGCAGATCAGGGACCTGATACTTGTTCTTCCCCTGATAGGCACCATAGATTCGGCGCGAGCAGCACAGATCGTTGAGCAGCTGTTGAACAGCATCGTGGATACGCAGGCATCTGTGGTCATAATAGACATCACAGGGGTACCTGTTATCGATACTGCGGTTGCCAACCACCTGATCAAGACGATACAGGCTGCAAAGATGCTTGGAGCAAACACCATCATAACCGGGATCAGTCCTGCAAATGCTCAGACCCTTGTCACACTTGGGGTCGATCTCTCAATGCTGACCACCAGAGGTACGCTGCGTTCGGGTGTAAAGCTGGCAGATGAGATGCTCAAGATCGAGGTAGTGGAAAAGAGGTAA
PROTEIN sequence
Length: 279
MTEQEELVEELSGLLEDNAGDLKMQWVKEMTEMGLLEKLTPIEIEQQSSTIYDTCVLTLKTGMYEAAKKYAREMAKKGVLEAMTVDQIIMGMLKLRDVYGRFVFSKYQSDAEKLYEVLGVYEPVANRILSIVALAFVEERERVIKEQQQAMLALSTPVLQIRDLILVLPLIGTIDSARAAQIVEQLLNSIVDTQASVVIIDITGVPVIDTAVANHLIKTIQAAKMLGANTIITGISPANAQTLVTLGVDLSMLTTRGTLRSGVKLADEMLKIEVVEKR*