ggKbase home page

RifSed_csp2_16ft_3_scaffold_2247_12

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(9229..9384)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L40e Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RI99_ARCPA similarity UNIREF
DB: UNIREF100
  • Identity: 79.6
  • Coverage: 49.0
  • Bit_score: 86
  • Evalue 6.90e-15
Ribosomal protein L40E {ECO:0000313|EMBL:KCZ73444.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 50.0
  • Bit_score: 104
  • Evalue 4.50e-20
50S ribosomal protein L40e similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 49.0
  • Bit_score: 86
  • Evalue 1.90e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 156
ATGGCAAGATTCCCCGAAGCTGAAAAAGTACTCCTGCATATGAAGATTTGCATGAAGTGCAATGCACGCAACTCACTGCGCGCGACAAGATGCAGAAAATGTGGATATACAGGTCTTCGTCCAAAATCCAAGGAAATAAAGGGCAAAGGAACGTAA
PROTEIN sequence
Length: 52
MARFPEAEKVLLHMKICMKCNARNSLRATRCRKCGYTGLRPKSKEIKGKGT*