ggKbase home page

RifSed_csp2_16ft_3_scaffold_2334_3

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(942..2033)

Top 3 Functional Annotations

Value Algorithm Source
Putative queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 363.0
  • Bit_score: 622
  • Evalue 2.70e-175
Queuine tRNA-ribosyltransferase (EC:2.4.2.29) similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 360.0
  • Bit_score: 393
  • Evalue 5.30e-107
Queuine tRNA-ribosyltransferase Tax=Peptoniphilus duerdenii ATCC BAA-1640 RepID=E0NMT2_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 52.3
  • Coverage: 363.0
  • Bit_score: 399
  • Evalue 2.60e-108

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1092
ATGTACGAACTTGTCCATAAAGATAAGAATACAGGTGCGCGAGCCGGAAAGCTCATGACGAACCATGGAATCATAGACACTCCTGCATTCATGCCGGTCGCCACGAAAGCCACGGTCAAGACACTCATCCCTGAAGAGCTTTATGATATGGGAACGCAGGTGCTCATCAGCAATGCATTCCATCTCTTTCTCTCACCGGGAATGGAGATTATCCAGAAAGCAGGCGGGCTGCACAGGTTCATGAACTGGGAACGTGCCATATTCACAGACAGCGGCGGCTTCCAGATGATACGCAAGGATTTCCAGTTCAGGATCACGGATGAAGGCATCATCTATAAAAACCCGCGCGATGGAAAAAAATACTCTTACACACCTGAGGTCTGCATGGAGAATCAGAAAATGCTCGGAAGCGATGTGGCGATGATCCTGGATGAATGCCCTGCCTGTGGAAGTGATCACAGCGTGGTGGAAGCATCGGTTGATCGGACGATAAGATGGGCAGGGATCGCAAGAGATGTGGAGAAAAATAGAGGTCAGCTCTTTTTTGCCATACTTCAGGGCGGGACTTTTGCAGATCTTAGAAAAAGATGCACTGAGGAGCTGATCTCAATGGACTTTGATGGATACGGCATAGGCGGTCTATCCATAGGTGAGCCCAGAGAAATAATGAACCAGATATTGAGATACAGCGTTCCACTCGTTCCCGAGGATAAGCCTCGCTATCTCATGGGCGTGGGCTCGCCTGCTGAACTGATCGAGGCAATAGGGTCTGGCATAGATATTTTTGACAGCGCCTTCCCGACAAGAAATGCCAGGCACCAGACGCTCATGACCTCAAAAGGAAATGTTGATATCGCCCGCGGAAAATTCGCAAATGATCTTGCAAAAGTTGATGAGGAATGCGGATGTTATACCTGCAGGAACTATACAAAGGCATACCTGCACCACCTTTTTAAAGAATCAGAACTGCTTGCGATGAGGCTTGCCTCGATCCATAACCTGAGCTTTATCCAGTCAATAATGAAAGGCGCAAGAGAAGCAATACTTGAAGATGGTTTTGTTGAGTTCAAAAGGAAGATGATCTTTTCATGA
PROTEIN sequence
Length: 364
MYELVHKDKNTGARAGKLMTNHGIIDTPAFMPVATKATVKTLIPEELYDMGTQVLISNAFHLFLSPGMEIIQKAGGLHRFMNWERAIFTDSGGFQMIRKDFQFRITDEGIIYKNPRDGKKYSYTPEVCMENQKMLGSDVAMILDECPACGSDHSVVEASVDRTIRWAGIARDVEKNRGQLFFAILQGGTFADLRKRCTEELISMDFDGYGIGGLSIGEPREIMNQILRYSVPLVPEDKPRYLMGVGSPAELIEAIGSGIDIFDSAFPTRNARHQTLMTSKGNVDIARGKFANDLAKVDEECGCYTCRNYTKAYLHHLFKESELLAMRLASIHNLSFIQSIMKGAREAILEDGFVEFKRKMIFS*