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RifSed_csp2_16ft_3_scaffold_2424_7

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 3704..4378

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TUJ3_METAC similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 221.0
  • Bit_score: 275
  • Evalue 2.70e-71
DNA repair and recombination protein RadB {ECO:0000256|HAMAP-Rule:MF_00350}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 217.0
  • Bit_score: 345
  • Evalue 3.90e-92
radB; DNA repair and recombination protein RadB similarity KEGG
DB: KEGG
  • Identity: 61.1
  • Coverage: 221.0
  • Bit_score: 275
  • Evalue 7.60e-72

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 675
ATGGACAGGATCACCTCTGGATGCAAATGTATCGACGACATGCTCGGCGGAGGCTTTGAAAAAGGGATAATCACCCAGCTCTATGGTGCATCCGGCACAGGAAAGACGAATATATGTATCCAGCTTGCAGTGGAAACCGTAAAGAGCGGGAAGAAGGTAATCTACATAGATACAGAAGGATTTTCAGCCGAGCGCTTCAAGCAGATCGCAGGAGAGGAGGCAAAAAAGATAGGTGGCAGCATAATCATATACGAACCTGCGAGCCTTGAACAGCAATACGCCAACATCGTCGATCTCGACAGGATAATGAGCGAGAAGATAGGTTTGATAGTTCTGGACTCAGCAGCGCTTTTCTACAGGCTCGGGCTCACAATGGAGGATTCAAACGAAGAGCATATGAAGCTTCGGCGGGAACTTGTGAACCAGATAGGTATCCTGCACGGCCTTGCCAGAAAATACGGGGTAGCAGTGGTGATCACGAACCAGGTTTACAGGGATGTCCCTTCAGGCGAGACGCATCCCATCGGAGGTACTGCACTGGAACATCTTTCAAAAACCATCATCATGCTTGAAAAAAAAGGGATATCAAGACGGAAGGCGACGCTCAAGAAGCACAGATCAAGAAGTGAAGATACAGGCTGTGAGTTCATGCTCACAGATAGGGGCGTTGAATGA
PROTEIN sequence
Length: 225
MDRITSGCKCIDDMLGGGFEKGIITQLYGASGTGKTNICIQLAVETVKSGKKVIYIDTEGFSAERFKQIAGEEAKKIGGSIIIYEPASLEQQYANIVDLDRIMSEKIGLIVLDSAALFYRLGLTMEDSNEEHMKLRRELVNQIGILHGLARKYGVAVVITNQVYRDVPSGETHPIGGTALEHLSKTIIMLEKKGISRRKATLKKHRSRSEDTGCEFMLTDRGVE*