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RifSed_csp2_16ft_3_scaffold_3168_19

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(15589..17628)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.5
  • Coverage: 673.0
  • Bit_score: 1152
  • Evalue 0.0
DNA topoisomerase I (EC:5.99.1.2) similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 685.0
  • Bit_score: 910
  • Evalue 1.80e-262
DNA topoisomerase 1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12ZL2_METBU similarity UNIREF
DB: UNIREF100
  • Identity: 64.1
  • Coverage: 685.0
  • Bit_score: 910
  • Evalue 6.50e-262

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 2040
ATGCATCTGATCATAACTGAGAAGCACGACACAGCCAGAAGAATCGCGGATATACTGTCAGGGAAAAAGCCCACGAAAGAAAGGGTGAGCGGCGTTGATACATACAGGCTCGATGGCAAGACCGTCATGGGTCTTTCCGGGCACATCGTGGAAGTGGATTTCCCGAAGGACTATAATAACTGGCAGAAAACGGATCTAAAAGACCTTATACATGCAAAGATCCTGACAACACCGACGCATGCGAACATTGTCACCGCGCTCAGGAAGCTTGGAAAGGAAGCACAGCATCTCACAATAGCCACAGACTACGATCGGGAAGGTGAATTAATAGGCGTCGAGGCTTTGAACGTGGTAAAGAAGGTGAACCCGAATATTAACGCGGACAGGGTACGCTACAGCACCATCACACCTGGAGAGATAAAAAAGACCTTTGCATCACCCACAAAAATTGACTTTGATCTAGCTGCTGCAGGTGAATCAAGGCAGGTCATCGATCTTATCTGGGGAGCAGTGCTGACCCGTTTTGTCTCCCTGAGTTCAGGGCGCCTGGGTGATAAGTTCCTCTCAGTGGGAAGAGTTCAGTCCCCCACACTTGCAATAATAGTAAACCGGGAAAAAGAACGCAAAGCTTTCGTACCTGTACCTTACTGGGAACTTTTCGCAACACTGGTGAATGGCGGTGAATTCGAGGCAGAGCATAAGAAAGGACGGTTTCCTGATAAGAGCGAGGCAGAAGCGATCAAGGCAAAGCTTGGAGAAACAGGGACAGTAAAGAGCATCGAGTTGGGAAAAAGAAATGAAAAACCCCCTGTGCCATTCAACACCACAGAGTTCCTCAGGTCAGCAAGTTCGATAGGGATCTCTGCAGCGAATGCGATGAGAATAGCAGAGTACCTGTATGTGAACGGATTTATATCATATCCGCGAACTGATAATACGGTTTATCCCCAGACCCTTGATACAAAGAGCATCATCGCTTCATTTCTGGACACGGAATTTCATGATTATGCCCAAAAGCTCCTTTCAGGAAAACTCATGCCCACAAAAGGTAAGAAGGAAACCACGGATCATCCTCCAATACATCCTGCCACCCCTGCCAGGAGGAGCGATCTGAAGGATGATGAATGGAAGATCTATGAACTCGTTGTTCGCCGATTCTTTGCGACGTTTGCGGATGAGACGCAGTGGGAGACCATGGCAGTGACAGTGGACATAAGCGGCGAGGAGTTCGGGGCAAACGGTGCAAGGCTGGTCAAACCCGGATGGAGATGGTACTATTCTTATAACGTGCCTGAAGACAGGATATTACCGCAGCTTAAAGAAGGGCAGATACTTACTGTAAAAGAGATCAATCTCATCGGGAAAGAAACACAGCCCCCATCAAGATACGGTCAGGGTCATCTGATAAAGATAATGGATGACCTCGGCCTAGGGACAAAATCCACGCGCCATGAGATCATCTCAAAGCTCTATTCCAGGGCTTATGTTGTGGGCAACCCGCTTCAGCCCACAAGAACCGCATTTGCAGTTATCGAGGCGCTTGAGAAGTATGCGAATACGATAACAAAACCAGAGATGACAAGTGAACTTGAGCAGGATATGGATGCGATATCAGAGGGGAAGATAAAAGAGGAACAGGTCATCCAGGTGTCCAGGGACATGCTGGACGAGGTGTTCAAAGACATGGACAGGAATAAAGAGCTCATCAGCGAATCCCTCAAGAACGGGCTGTATGAGGACAGGATCATAGGGACGTGTATGAAATGCTCCTCTGACCTGATCATCAGAAAATCTAAAAAGGGCTCCAGGTTCATAGGATGCTCAGGTTACCCGAACTGTGATTTTACCCTTCCACTGCCCAGGACAGGGCAGATAGTGGTCACTGAAAATCAGTGCAAGGATCACGGTCTTAATCTTATCAAGATAATAAACAAAGGTAAGCGCCCATGGGACATCGGATGTCCTCACTGCAATTTCATAGAGTGGCAGAAAAAGCTTGATGAAGAGAAGAAAAAATCAGATGCCATAGCAGCAAAATAG
PROTEIN sequence
Length: 680
MHLIITEKHDTARRIADILSGKKPTKERVSGVDTYRLDGKTVMGLSGHIVEVDFPKDYNNWQKTDLKDLIHAKILTTPTHANIVTALRKLGKEAQHLTIATDYDREGELIGVEALNVVKKVNPNINADRVRYSTITPGEIKKTFASPTKIDFDLAAAGESRQVIDLIWGAVLTRFVSLSSGRLGDKFLSVGRVQSPTLAIIVNREKERKAFVPVPYWELFATLVNGGEFEAEHKKGRFPDKSEAEAIKAKLGETGTVKSIELGKRNEKPPVPFNTTEFLRSASSIGISAANAMRIAEYLYVNGFISYPRTDNTVYPQTLDTKSIIASFLDTEFHDYAQKLLSGKLMPTKGKKETTDHPPIHPATPARRSDLKDDEWKIYELVVRRFFATFADETQWETMAVTVDISGEEFGANGARLVKPGWRWYYSYNVPEDRILPQLKEGQILTVKEINLIGKETQPPSRYGQGHLIKIMDDLGLGTKSTRHEIISKLYSRAYVVGNPLQPTRTAFAVIEALEKYANTITKPEMTSELEQDMDAISEGKIKEEQVIQVSRDMLDEVFKDMDRNKELISESLKNGLYEDRIIGTCMKCSSDLIIRKSKKGSRFIGCSGYPNCDFTLPLPRTGQIVVTENQCKDHGLNLIKIINKGKRPWDIGCPHCNFIEWQKKLDEEKKKSDAIAAK*