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RifSed_csp2_16ft_3_scaffold_3176_12

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 10921..11355

Top 3 Functional Annotations

Value Algorithm Source
Predicted nucleic acid-binding protein, containing PIN domain Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JG21_THEKO similarity UNIREF
DB: UNIREF100
  • Identity: 38.7
  • Coverage: 142.0
  • Bit_score: 118
  • Evalue 4.60e-24
nucleic acid-binding protein similarity KEGG
DB: KEGG
  • Identity: 38.7
  • Coverage: 142.0
  • Bit_score: 118
  • Evalue 1.30e-24
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67 similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 144.0
  • Bit_score: 254
  • Evalue 5.80e-65

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Taxonomy

BJP_08E140C01_10KDA_Methanosarcinales_43_67 → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 435
ATGACTAAGATTTATATTGATACAAATATTTTTTTCAACGTCTGGAATGAGGAGATAGACCCAAAAAGTGGAAAGGCACTCTGGAAAGGTTCTAAGGAATTACTGAAAAAAACCGAAAAAAAAGAATTTGAAGCCATAACTTCGATTACCACTATAATGGAAATCGTCCATATTTTCAGAGTAAGAGGTAAGGACTATAACGAAGCTATTGATGACATCAAGAAGCTGAATATTAAGATCAATGTACCGGATTCCTGGGTTATGATCAAAGCTCTGGAATACCAGATGGAATATGAATTGGATCCCTATGACTCAATAGCTTTTGCAATTGCAGATACTGCCGAATGTGAAATTTTCGTGACGAGAGATGGTAAGATTATTAAGAATATAAAAACGAAAATGCGCGGCGCTGAGCCGGAAGATATCCAGGATTGA
PROTEIN sequence
Length: 145
MTKIYIDTNIFFNVWNEEIDPKSGKALWKGSKELLKKTEKKEFEAITSITTIMEIVHIFRVRGKDYNEAIDDIKKLNIKINVPDSWVMIKALEYQMEYELDPYDSIAFAIADTAECEIFVTRDGKIIKNIKTKMRGAEPEDIQD*