ggKbase home page

RifSed_csp2_16ft_3_scaffold_3623_27

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(25608..26231)

Top 3 Functional Annotations

Value Algorithm Source
Translation initiation factor 6 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B9G3_METTP similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 207.0
  • Bit_score: 240
  • Evalue 8.80e-61
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 207.0
  • Bit_score: 305
  • Evalue 3.10e-80
translation initiation factor IF-6 similarity KEGG
DB: KEGG
  • Identity: 57.5
  • Coverage: 207.0
  • Bit_score: 240
  • Evalue 2.50e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 624
GTGGTCGGGGTATTTGCAGCCTGCACAGAGGATTTTGTTTTTGTCCCGCATGACATTTCTCTGGAACTGATAAAAGATCTGGAAGAATCGCTGAACGTAGCTGCGGTCAGAACCTCGGTCGGAGGAAGTACAGTCATCGGTACGCTGTCACGCGGGAATACAAAAGGTACCGTAATCGCTGGTTTTATTCTTGAAAAGGAACTCAGGAAAATAAGAAAGCATGTGAAAGCCGCGCGATTGCCAGGGGAATTGAACGCAGCCGGCAATCTCATTCTCGCAAACGACACTGCTGCACTTGTGCATCCCGACCTCTCTGATAAAGCTGCAGGCATCGTTAAGAAGACCCTGGGAGTTGATGTGAGAAGAGGTACTGTGGCAGGATTGAAGACCGTGGGCATGGCAGCGATCGCCACGAACAGCGGGGTGCTGGTGCATCCGAAAACCACTGATTCAGAGTTCGCTGTACTTGAAGATCTGTTCGGTCTGCCTGTGGAGATAGGCACAGTGAATTTCGGCTCACCTCTTGTTGGTTCAGGGCTTCTTGCCAACGGCAAGGGCTGCGTGGCAGGGGAAGATACAACAGGACCTGAGATCACCAGAATAGAGGATGCGCTCGGCTTCTGA
PROTEIN sequence
Length: 208
VVGVFAACTEDFVFVPHDISLELIKDLEESLNVAAVRTSVGGSTVIGTLSRGNTKGTVIAGFILEKELRKIRKHVKAARLPGELNAAGNLILANDTAALVHPDLSDKAAGIVKKTLGVDVRRGTVAGLKTVGMAAIATNSGVLVHPKTTDSEFAVLEDLFGLPVEIGTVNFGSPLVGSGLLANGKGCVAGEDTTGPEITRIEDALGF*