ggKbase home page

RifSed_csp2_16ft_3_scaffold_3697_3

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 2180..2443

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=Q05DW3_AERPE similarity UNIREF
DB: UNIREF100
  • Identity: 40.5
  • Coverage: 84.0
  • Bit_score: 66
  • Evalue 9.60e-09
Looped-hinge helix DNA binding domain, AbrB family {ECO:0000313|EMBL:KCZ70915.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 87.0
  • Bit_score: 157
  • Evalue 7.60e-36
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 84.0
  • Bit_score: 66
  • Evalue 2.70e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 264
ATGGAAATCGTGAGCATCGATAAAGCCGGCAGAATCGTTATTCCTGGCGCCCTGCGTAAGAAACTGAAGCTGAATGAAGGATCAAAGCTGCTCATAGCAGATGTTAAAAATGACCTTTTGATCATCAAAAAAATAAAAATAGAAGAACTGGCGGAACAGCTTGAGAAAGATTTCAAAAACATCGATATCGATAACATAGTTGGCAAGGTGCGAAGTGAAGTCAAAGAAAAAATCAGGAAAAAGCACCCGTCGGTTTTTGGTTGA
PROTEIN sequence
Length: 88
MEIVSIDKAGRIVIPGALRKKLKLNEGSKLLIADVKNDLLIIKKIKIEELAEQLEKDFKNIDIDNIVGKVRSEVKEKIRKKHPSVFG*