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RifSed_csp2_16ft_3_scaffold_3697_24

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(16280..17560)

Top 3 Functional Annotations

Value Algorithm Source
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.4
  • Coverage: 426.0
  • Bit_score: 771
  • Evalue 3.20e-220
Phosphomethylpyrimidine synthase Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4C003_METCG similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 427.0
  • Bit_score: 679
  • Evalue 2.00e-192
thiC; thiamine biosynthesis protein ThiC similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 427.0
  • Bit_score: 679
  • Evalue 5.70e-193

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1281
ATGGGTCTTATCACAGAAGCAAAAAATGGCCGCCTGACCGAAGAGATGAAACAGGTAGCAAAGGACGAAGATGTCGAACCTGAATTCGTGCGGCGCGGGATAGCGAGCGGACGGATAGTCATTCCTGTGAGTCCGTATCGTCGTACAAAGCCCTGCGGAATAGGGAAAGGGCTCTGCACCAAGGTGAATGCATCCATAGGAACTTCATCAGACATAGTTGACATGGAGATGGAAATAAAGAAAGCAAAGGTCGCTGAGAAAACCGGGGCAGATACCCTCATGGAGCTCTCCACAGGCGGGGATTTCTATGAGATCAGGAGAAGGGTGATCGATTCAACCGAACTCTCTGTGGGAAGCGTGCCGTTGTACCAGGCCTTTATCGAAGCCATCAGGCGATATGGAAGCGCTGTGGACATGAAAGAGGATGAGCTCTTCAGGATCACGGCAGAGCAGGCAAAGCTCGGGACAAATTTCATGGCGATACATACAGGGATAAACCTCCTGACCGTGGAGAGGCTCAAAAAACAGGGACGGTTCGGAGGACTCTGCTCCCGGGGCGGGGCTTTCATGACAGCATGGATGCTGCATAACGAGAAAGAGAACCCCCTGTTCAGTGAGTTCGATTACCTGCTCGAGATCATGAAAGAGCATGAGGTGACCCTGAGCATGGGCAATGGAATGCGGGCAGGAGCGATCCACGATTCCACTGACAGGGCGCAGATACAGGAACTTATCATAAATTCTGAGCTATCTGACAGGTCGCATGAGGCTGGAGTACAGACCATGGTAGAAGGTCCGGGACATATCCCAATAGACGAGATTGAGACGAACGTGAAGCTCATGAAGAGGTTGAGCGGTGAAAAACCCTTCTACATGCTCGGGCCCCTTGTCACTGACATTGCGCCCGGGTATGATCATATCGTGGCAGCGATCGGTGCATCTCTCTCAAGCGCCTATGGCGCTGATTTCATCTGTTACGTGACGCCTGCAGAGCATCTTGCTCTGCCCAATGTTGAGGATGTGAGGCAGGGCGTGATAACAGCAAGGATTGCGGCACACATAGGCGATATGATCAAGAACGATGACAGACAGTCAGACCTTGAAATGGGGCGAGCAAGACGCGACCTGAAATGGGAAAAGATGTTTGAACTTGCGATAGATCCTGAGCAAGCGCGGGCAGTCAGGGACAGCCGCTCGCCAGAGGACGAGGAAGCCTGCACCATGTGCGGCAACTACTGCGCCTTGAAGATCGTGAAGCAGAGCTTCAATTTTGAACGGTGA
PROTEIN sequence
Length: 427
MGLITEAKNGRLTEEMKQVAKDEDVEPEFVRRGIASGRIVIPVSPYRRTKPCGIGKGLCTKVNASIGTSSDIVDMEMEIKKAKVAEKTGADTLMELSTGGDFYEIRRRVIDSTELSVGSVPLYQAFIEAIRRYGSAVDMKEDELFRITAEQAKLGTNFMAIHTGINLLTVERLKKQGRFGGLCSRGGAFMTAWMLHNEKENPLFSEFDYLLEIMKEHEVTLSMGNGMRAGAIHDSTDRAQIQELIINSELSDRSHEAGVQTMVEGPGHIPIDEIETNVKLMKRLSGEKPFYMLGPLVTDIAPGYDHIVAAIGASLSSAYGADFICYVTPAEHLALPNVEDVRQGVITARIAAHIGDMIKNDDRQSDLEMGRARRDLKWEKMFELAIDPEQARAVRDSRSPEDEEACTMCGNYCALKIVKQSFNFER*