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RifSed_csp2_16ft_3_scaffold_3807_5

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 2112..2846

Top 3 Functional Annotations

Value Algorithm Source
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.5
  • Coverage: 244.0
  • Bit_score: 318
  • Evalue 4.20e-84
Glutamate dehydrogenase bin=GWD2_Nitrospirae-related_57_8 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits similarity UNIREF
DB: UNIREF100
  • Identity: 61.9
  • Coverage: 244.0
  • Bit_score: 301
  • Evalue 5.00e-79
Glu/Leu/Phe/Val dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 242.0
  • Bit_score: 240
  • Evalue 3.90e-61

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Taxonomy

Methanococcoides methylutens → Methanococcoides → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 735
GTGGTCACAGGCAAACCGCTTGAGCTCGGAGGGAGCAGGGCGCGCAGCTATTCAACATCACTTGGCGGGATACACATTCTTGAGGAAGCCTTACAGAAAAAAAGAATGGATAAATCCGGGGTCAGGATTGCGATCCAGGGGTTCGGGAACGTAGGAGAAAATGGAGCCAGGATACTTCACAAGAGGGGATATAAGATCACTGCTGTGAGCGATTCAAAAGGCGGAATTCATTCAGATGAGGGACTGGATATCCCGGGGGTAATGCAGCATAAATCAAATACAGGAAGCGTTGTTGATTTTCCGGGAAGCACAAATATAACGAACGAGGAACTGCTTTCATCGGATTGCGAGATCCTGATCCCTGCAGCGCTCTCGGAGCAGCTTCATAAGGATAATGCAGGGAATGTGAAAGCAAAAATAATCCTTGAGCTTGCGAACGCTCCCACGACCATAGATGCAGATGAGATATTTTCAAGAAACAAGATCATGTTGATACCTGATATTCTTGCAAACGCAGGAGGTGTGGTGGTGAGTTATTTTGAATGGATCCAGAACCTGAATAACGACTACTGGGAAGAAAAGAAGGTTCTTGAGAGACTGAATAGCATCATGACAGCGGCATTCAACGATGTCCATGCGATCTGCCAGGAAGAGAACCGGGGGTTGAGAAAGGCGGCGTATCAACTTGCGGTAAAAAGGATACTGCACTCAGAAAGGCTGCGCGGGAACCTGTGA
PROTEIN sequence
Length: 245
VVTGKPLELGGSRARSYSTSLGGIHILEEALQKKRMDKSGVRIAIQGFGNVGENGARILHKRGYKITAVSDSKGGIHSDEGLDIPGVMQHKSNTGSVVDFPGSTNITNEELLSSDCEILIPAALSEQLHKDNAGNVKAKIILELANAPTTIDADEIFSRNKIMLIPDILANAGGVVVSYFEWIQNLNNDYWEEKKVLERLNSIMTAAFNDVHAICQEENRGLRKAAYQLAVKRILHSERLRGNL*