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RifSed_csp2_16ft_3_scaffold_3807_20

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 13933..17355

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase II large subunit {ECO:0000255|HAMAP-Rule:MF_00324}; Short=Pol II {ECO:0000255|HAMAP-Rule:MF_00324};; EC=2.7.7.7 {ECO:0000255|HAMAP-Rule:MF_00324};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 /; ACE-M).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.0
  • Coverage: 1158.0
  • Bit_score: 1497
  • Evalue 0.0
DNA polymerase II large subunit (EC:2.7.7.7) similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 1158.0
  • Bit_score: 1497
  • Evalue 0.0
DNA polymerase II large subunit Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=DP2L_METBU similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 1158.0
  • Bit_score: 1497
  • Evalue 0.0

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Taxonomy

Methanococcoides burtonii → Methanococcoides → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 3423
ATGAAATTTGCTGCAAGCCAGGCGATGATTTCATATTTCAACAGCCTTGAATCCGAGCTCAATAGCGCCATAGAGCTCGCGAACAGGGCGCGTGCGAACGGAGCAGACCCCGCACCTGCGGTGGAGATACCCATAGCGAAAGACCTTGCAGACAGGGTTGAAAAACTGATGGGAATAGAAGGGGTTGCAGAGAGGCTGCGTGACCTCGAGGCTAAAATGTCGCGCGAAGAGGCTGCTTTGCAGGTCGCGATTGAGATAGCAAAAGGTGAAATTTCTCAATTCGAGTCAAAAAAGGACGCTTTAGACGCAGCAGTGCGTGTGGCAGTGGCTATCCTCACCGAAGGAGTGGTGGCTGCACCGATCGAGGGGATCGCGAAGATAGACCTTGCGAAAAACGATGACGGCTCAGACTATATCAGAATATATTATGCAGGTCCGATAAGAAGCGCAGGCGGCACAGCCCAGGCGCTCTCTGTACTTGCGGCAGACTATGTGAGAAGAAGCCTGGGGATTAACAATTTTATCCCGCGGCCTGAAGAGGTCGAGCGCTATGTCGAAGAGATTGCAGCTTATAGAAGAGTGGCAAACCTCCAGTATCTTCCTTCAGAAGAAGAGATCAGGCTGATCGTGAGGAACTGCCCTGTCTGCATAGACGGTGAGCCCACCGAGGAGGCAGAGGTAGAAGGGCGGCGCGATCTTCCGAGAATCGAAACGAACAGGATACGGGGAGGGATGGCGCTCGTCATCGCTGAAGGCATAGCGCTCAAAGCCCCGAAAGTGAAAAAACATGTGGACAAGCTCGGACTTGACGGCTGGGAGTGGCTTGATAAATTCGCGGTTACCGTTAAGACAGATGAGGCTTCTTTGCAGCTTAAACCAAAAGACAAGTACCTGCAGGACCTGATCGCAGGGCGTCCCGTTTTCTCCTATCCTTCAAGACCAGGAGGCTTCAGGCTCAGATACGGCAGAGGAAGGAACACCAGCTTCGCGGCTGCAGGCATAAGCCCAGCGACTATGGCAATGATGGACGATTTCATAGCAGCAGGCACACAGATAAAGGTTGAGAGACCTGGAAAGGCAGCAGGTATAGCGCCTGTGGACGCGATCGAAGGTCCGACCGTGCTTTTATTTAATGGCGATGTTTTAAGGGTGGATACTGCTGAAGATGCATTGCGGATAAGACCGTCTGTGCAGAGAATTCTCGATATCGGTGAGATTTTGATAAATTTCGGTGATTTCCTCGAGAACAACCATCCTCTTGTACCATCGTCGTACTGCTACGAATGGTGGGTACAGGAACTTTCAGCAAAGACGGCTGTGGAAAATCCCGGGCACTTAAGAGATCCAGATCAGAACACTGCACTATCTCTATCAGACACGTTCAAAGTGCCGCTCCATCCGAAATTCACCTACCTGTGGCACGATATTAAGATAGAGGATCATACTGCGCTCGCAGAATATATCCAGAAAAATGGCAGACTTGCTGGTAAACTTCAATTCCCGCTCGATAATGAAATAAAATCCATTCTTGAAACACTGCTTCTACCTCATCTTGTGCGTGAGAAGCAGATCATCATTGAAGAGCCGCTTCCTCTGATAAGATGCCTGGGGCTTGATGAAAATCTGAAAAAGACCTGGACTTCGTCAGAGTCAGGCATCATGGAGATGGTATCAAAAGTGAGCGGAATGATCATCCGAAGCCGCGCCCCTGTCAGGATAGGTGGAAGGATGGGAAGACCTGAGAAATCAGATAAACGTGAGATGAAACCTGCACCTCATGTGCTTTTCCCGATCGGGGAAGCAGGGGGAAGGAGGAGGTCGCTGCAGAGTGCAAAAGATTTCGTGGATGACGAAGGTGAGGAGAAGAAAAACGATCTTAAAACAGGACTTGCAGTCCAGAAAGAAAAGGTGGGGACAATAAAGGTGCAGATAGGGGAGCGCATATGTCCTTCATGCAAAATCAGAACATTCAAGAACAGATGCAGTTGCGGCAGATTCACTCAGCCTGTGCTCAAATGCTCATCCTGCGGGATCGAAGTTAACAAAGTTGTATGCCCGAAATGCAGGAAAGAGACCACGTCAGTAGTGGAAATGTCGATCGACTTCAAGTCAGAATATCAGCTTGCGCTGAACAACGTTGGCGAAAGGGATAACTTCGAATCGATAAAAGGTGTGCTCGGGCTCATATCAAAGAACAAGACGCCTGAGCCGCTTGAGAAGGGCATCCTTCGGGCAAAGCATGATATCGTGATGTTCAAGGACGGAACTGTGAGGTACGACCTCTCAGACCTCCCTCTTACACATGTAAAACCTCAGGAGATAGGGGTTCCAGTAACGAAGCTCAGGGAACTCGGATATGATAGGGACACATATGGAAGACCGCTTGTTGATGAGGATCAGATACTTGAACTCAAGGTACAGGATATCGTTGTTTCAAAGGACTGTGGCGAATATTTGCTTAAGACCGCAGGGTTTATTGATGACCTTTTGACGAAATATTACAGAGTCGACCCGTACTACAATATTAGCAGCATCGGGGAACTTATTGGAAAACTCGTCATAGGGCTTGCGCCGCACACCTCAGCTGGCGTCCTGGGCCGCCTGGTCGGTTTTACGACCGCATCCGTGGGCTATGCGCATCCCTTTTTCCATGCCGCAAAAAGAAGGAACTGCGATGGCGACGAGGACTGTGTGATGCTGCTCATGGACGGGCTTTTGAACTTCTCGCGCTCATACCTCCCTGACAAAAGGGGCGGTCAGATGGATGCGCCTCTCGTGCTCACCACGCGTATCGACCCGAATGAGGTGGATAAGGAAGCCCACAACATAGACGTGCTTTTCCAGTACCCTCTTGAGTTCTATGAAGCCACGCTGCAGTACAAAAACCCGAAGGATATCGTGAAATTCATGGATATCGTGAGCGGAAGGCTGGGTACACCTGCGCAGTACGAGGGTTTCGGCTTCACACATGATACCGCGGATATCGCAGCCGGTCCCAGGAACAGTGCGTACAAGACGCTGGGGACGATGATAGAGAAGATGGATGCGCAGCTCGCTCTGGCGCGGAAGATAAAAGCTGTGGACCCGCAGGATGTTGCCGAGAGGATTATCAATTCGCATTTTCTGCCAGACCTGATAGGCAACCTGCGCTCTTTCTCAAAGCAGAAGGTGAGGTGCACGAAATGCAATGCAAAATACAGGCGCCCGCCGCTTCGGGGGACGTGCCCCAGGTGCGGGGGGAACATTGTGCTTACCGTGCACGAGGGCTCGGTGAGGAAATATCTTGAGACCTCATTGAGGATAGCGGATGAGTACAATGTGCGGCATTATACGAAGCAGAGGCTTTTGCTGCTGGAGCTTGAGATGGATTCTCTCTTCGAGAGCGATAAGGTGAGGCAGAAGGGGCTGGCGGATTTTATGTGA
PROTEIN sequence
Length: 1141
MKFAASQAMISYFNSLESELNSAIELANRARANGADPAPAVEIPIAKDLADRVEKLMGIEGVAERLRDLEAKMSREEAALQVAIEIAKGEISQFESKKDALDAAVRVAVAILTEGVVAAPIEGIAKIDLAKNDDGSDYIRIYYAGPIRSAGGTAQALSVLAADYVRRSLGINNFIPRPEEVERYVEEIAAYRRVANLQYLPSEEEIRLIVRNCPVCIDGEPTEEAEVEGRRDLPRIETNRIRGGMALVIAEGIALKAPKVKKHVDKLGLDGWEWLDKFAVTVKTDEASLQLKPKDKYLQDLIAGRPVFSYPSRPGGFRLRYGRGRNTSFAAAGISPATMAMMDDFIAAGTQIKVERPGKAAGIAPVDAIEGPTVLLFNGDVLRVDTAEDALRIRPSVQRILDIGEILINFGDFLENNHPLVPSSYCYEWWVQELSAKTAVENPGHLRDPDQNTALSLSDTFKVPLHPKFTYLWHDIKIEDHTALAEYIQKNGRLAGKLQFPLDNEIKSILETLLLPHLVREKQIIIEEPLPLIRCLGLDENLKKTWTSSESGIMEMVSKVSGMIIRSRAPVRIGGRMGRPEKSDKREMKPAPHVLFPIGEAGGRRRSLQSAKDFVDDEGEEKKNDLKTGLAVQKEKVGTIKVQIGERICPSCKIRTFKNRCSCGRFTQPVLKCSSCGIEVNKVVCPKCRKETTSVVEMSIDFKSEYQLALNNVGERDNFESIKGVLGLISKNKTPEPLEKGILRAKHDIVMFKDGTVRYDLSDLPLTHVKPQEIGVPVTKLRELGYDRDTYGRPLVDEDQILELKVQDIVVSKDCGEYLLKTAGFIDDLLTKYYRVDPYYNISSIGELIGKLVIGLAPHTSAGVLGRLVGFTTASVGYAHPFFHAAKRRNCDGDEDCVMLLMDGLLNFSRSYLPDKRGGQMDAPLVLTTRIDPNEVDKEAHNIDVLFQYPLEFYEATLQYKNPKDIVKFMDIVSGRLGTPAQYEGFGFTHDTADIAAGPRNSAYKTLGTMIEKMDAQLALARKIKAVDPQDVAERIINSHFLPDLIGNLRSFSKQKVRCTKCNAKYRRPPLRGTCPRCGGNIVLTVHEGSVRKYLETSLRIADEYNVRHYTKQRLLLLELEMDSLFESDKVRQKGLADFM*