ggKbase home page

RifSed_csp2_16ft_3_scaffold_3935_5

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(2926..3519)

Top 3 Functional Annotations

Value Algorithm Source
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase glutaminase subunit {ECO:0000256|HAMAP-Rule:MF_01615}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 195.0
  • Bit_score: 312
  • Evalue 2.40e-82
Glutamine amidotransferase subunit PdxT Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=PDXT_METBU similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 194.0
  • Bit_score: 262
  • Evalue 2.10e-67
glutamine amidotransferase subunit PdxT similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 194.0
  • Bit_score: 262
  • Evalue 5.90e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 594
ATGCGCATAGGAGTCATCGCACTTCAGGGAAACGTGGAAGAGCACGTCATTGCTTTATACAGGGCATTGAAGCTAAAGAATCTTGATGCAGAGGTGGTCGGGATAAAGCATAAAGGAATAGTTCCTACCTGTGATGCTCTGGTAGTTCCAGGTGGAGAAAGCACGACGCTTGGAAGGCTGATGGAGCGGGAAGGGATTTCTCCGGAGATTAAAAAAGAAGCCAATTTCGGTATTCCGATAATGGGAACATGCGCAGGACTTGTGCTGCTCGCAAAGCAGGGGGACAGGCAGGTGGAACAGACACGCCAGCCGCTGCTTGGACTGATGGATATAAAAGTCAACAGGAACGCATTCGGACGTCAGCGAGAATCATTCGAGTGCCCTGTGGATTTCAATGGTTTTGATTCACCTTTCAATGCTGTGTTCATCCGTGCGCCATGCATCACCGAGACTGGAAAGGATGTTGAGATCCTCTCAAAACACAATGGCTCCATTGTTGCTGCAAGACAGAAGAACCTGCTCGCTCTTGCGTTCCATCCTGAGTTGACTGATGATCTGCGCATACATGAATATTTTTTAAACATGAAGGGTTAG
PROTEIN sequence
Length: 198
MRIGVIALQGNVEEHVIALYRALKLKNLDAEVVGIKHKGIVPTCDALVVPGGESTTLGRLMEREGISPEIKKEANFGIPIMGTCAGLVLLAKQGDRQVEQTRQPLLGLMDIKVNRNAFGRQRESFECPVDFNGFDSPFNAVFIRAPCITETGKDVEILSKHNGSIVAARQKNLLALAFHPELTDDLRIHEYFLNMKG*